| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0906 |
|---|
| Symbol | |
|---|
| ID | 5596795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1944465 |
|---|
| End bp | 1946000 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640930512 |
|---|
| Product | ubiquinol oxidase |
|---|
| Protein accession | YP_001467777 |
|---|
| Protein GI | 157165133 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGA TGGATTTTGT TGATTGGTCT AGGGCTCAGT TTGCGCTGAC TGCCATTTAC
CACTTTTTGT TTGTCCCGCT TACGTTGGGG CTAAGTTTTA TCATCGCCAT TATGGAGACG
ATATATGTCA AAACTGGCGA TAAGGCCTGG CTTGAGATAA CGAAATTTTG GCTAAAGCTC
TTTGGTATAA ATTTCGCTAT TGGTGTGGCT ACTGGCATCA TCATGGAGTT TGAGTTTGGT
ACAAACTGGG CGAATTATAG CTGGTTTGTA GGCGACATCT TCGGTGCTCC GCTTGCTATT
GAAGGCTTGC TCGCATTTTT CATGGAGAGT ACATTTTTTG CCATTATGTT TTTTGGCTGG
GATAAGGTTA GTAAGAAATT TCACCTGCTT TCAACTTGGC TTGTTGCGAT CGGTTCAAAT
TTAAGCGCAC TTTGGATCTT GATCGCAAAT GGCTGGATGC AATATCCAAT AGGTATGAAA
TTTAACCCAG ATACCGCTAG AATGGAGATG CAAAATTTCT TTGAAGTTGC ACTAAATCCA
CTTGGTATAA CTAAATTTTT ACACACAGTA ACTAGCGGCT ACACTATCTC AGCTATTTTT
GTGATAGGAA TTTCTGCTTG GTTTTTGATA AAAAAACGCC ACATCTTGCT AGCTAAAAAA
AGTATCGTCG TTGCTAGCGC ATTTGGACTT ATCACTTCAG CATTTTTACT ACTTAGTGGC
GACGAGAGCG CATATCTTGC AGCTCAAAAG CAGCCTATGA AACTTGCAGC CATGGAGGGA
CTTTACAAGG GCGAGAAAAA CGCTGGCCTA GTTGCAGCTG GTATTTTAAA CCCAGCTAAA
AAGCTTGGCG ATGACACTGA GCCATTTTTG CTTGAGATAA AGGTGCCTTA CGCACTTGGC
ATCATGGCAA ACAGAGAGCT TGACTCATTT ACACCAGGCA TAAACGACCT ACTTTATGGC
AACAGCGAGC GCGGCATAAT GGGCGTAGAA GAGAAGATGG CAAAAGGCAA AGTAGCTATC
GAAGCTCTTA AAAACTACAA AGAGGCTAAA AAAGCAAATG ACGAGAGCTT GATGAAAAGC
TCGCTTTCAA ATTTAGAGAG CAATCTAAAT TTCTTAGGAT ATGGCTATCT TAAAGATGCA
AAAGATGCTG TGCCACCAGT TGCACTTACA TTTTATAGCT TCCACATCAT GGTCGCTCTT
GGCACATATT TCATAGCTCT TTTTGCTATC ACTCTTTATC TAAATCTTTC AAAAAAATAT
AAATTTGAAA ACATAAGAGC GTTTTTGTGG ATCTGCCTCT TTACCATACC GCTTGGCTAC
ATCGCAGCTG AGGCTGGCTG GATAGTAGCA GAGGTCGGCC GTCAGCCATG GGCGATACAA
GATCTCATGA CCGTTGGCGT CGGAGCTACA AATTTATCTG ACTCAAATGT CAAAATTTCA
TTTATATTAT TTGCTGTTTT ATTTACGGTC TTGCTGATTG CCGAGATCAA AATCATGCTT
AAGCAAATAA AGATAGGATT TAACGACCAT GCATAG
|
|---|
| Protein sequence | MSEMDFVDWS RAQFALTAIY HFLFVPLTLG LSFIIAIMET IYVKTGDKAW LEITKFWLKL
FGINFAIGVA TGIIMEFEFG TNWANYSWFV GDIFGAPLAI EGLLAFFMES TFFAIMFFGW
DKVSKKFHLL STWLVAIGSN LSALWILIAN GWMQYPIGMK FNPDTARMEM QNFFEVALNP
LGITKFLHTV TSGYTISAIF VIGISAWFLI KKRHILLAKK SIVVASAFGL ITSAFLLLSG
DESAYLAAQK QPMKLAAMEG LYKGEKNAGL VAAGILNPAK KLGDDTEPFL LEIKVPYALG
IMANRELDSF TPGINDLLYG NSERGIMGVE EKMAKGKVAI EALKNYKEAK KANDESLMKS
SLSNLESNLN FLGYGYLKDA KDAVPPVALT FYSFHIMVAL GTYFIALFAI TLYLNLSKKY
KFENIRAFLW ICLFTIPLGY IAAEAGWIVA EVGRQPWAIQ DLMTVGVGAT NLSDSNVKIS
FILFAVLFTV LLIAEIKIML KQIKIGFNDH A
|
|---|
| |