| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0892 |
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| Symbol | acrB |
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| ID | 5596279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 651995 |
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| End bp | 653461 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640929225 |
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| Product | acriflavine resistance protein |
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| Protein accession | YP_001466533 |
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| Protein GI | 157165040 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00239109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAAG ATATAAAAAA TCAACAAAAT GAAAATTTAA AGCCAGACGA AAAGCCAGTC
CAAAAAAGTG ACATAAAAGA TCAAGAGAGC GCTGGAGATC AAATTTTAAA TAGCGTAGAT
GGCATCAAGT CAAACATCCA AGCAAAAAAC TACGATGCTT ATGACTTGAA ATTTATGTCA
AGCCTCTCAG AAGCAGTTTT GGCAAAAGCT CCATCAACCT CAAAAAAGAT ACTTTATGCA
GTTAGCATAA CTGTGTTTTG GCTACTTCTT TGGGCTTCGT GGGCGCAGAT AGATGAGATA
ACAAGAGGTA GTGGCAAGAT CATCCCATCA GGCAAAAACC AAGCGATACA AAACCTTGAG
GGTGGTATCG TGGATCAAAT TTTTGTAAAA GAGGGCGATG AGGTAAAAAA AGATCAAATT
TTAATCAGAC TTGATAATAA AAACTTTACA AGTAGCTACG GCGAGTCAAA GCTAAGACTT
GATGAGCTTC AGGCTAAATT TATGAGGCTT GATGCTGAAG CAAATGATAA AGAATTTGAC
TACAACGAAA CAAGAGATGC GAACAATAGC AAGGCTGTAA GATACGAGAT AAGCTTGCAT
AACTCAAACA TCGATCACCT AAACGAGCAA ATAGGAATTT TAACAGAGCA AATTCACCAG
CGCCAAAGTG AGCTAACCGA GCTTAGAAAT AAAATTTCTC AAACTCAAAA TAGCTACAAT
CTTGTCTTAA AAGAAAAAGC GATCATGGAG CCTATCTTTA AAAAAGGTCT TGTTAGTGAG
GTCGAGTATA TCCAGCTTCA AAGACGTGTA AATGACCTAA AGGGCGAGCT TGACGCATCT
GTGCTTGCCG TGCCAAGGGT CGAATCAACC ATAAAAGAGG CGAAAAATAA GATAGAAGAG
GCAAAGCTGG CATTTAAAAA CAATGCAAAA AAAGAGCTAA ACGAAGTCTC TGCTGAGATC
GCAAGGATAA ACGAGTCGCA AATCAGCCTA AGTGATAGAG TTGAAAGAAC TTATGTAAGA
TCTCCTGTAA ATGGTATCGT TAGTAAGATG ATGGTGCATA CCGTCTCAGG CGTTATCAAG
CCTGGTGAAA ACATCGCTGA GATCGTCCCA CTAGAAGATA AGCTTATCGC TGAGGTAAAG
GTTAAGCCAG CTGACGTTGC ATTCTTAAGA CCGGGGCTTG ATACGATGGT TAAATTTACG
GCGTATGATT TTAGTATTTA TGGCGGCTTA AAAGGCAAAG TAACGCAGAT CAGTGCCGAT
ACTGAGACAA ATGAAAAAAC AGGCGAGAGC TACTATCTAG TCAGGATAGA AACTGAGAAA
AACTATCTTG GTAGCGAAGA GAAGCCACTT AGGATAAAGG TTGGTATGAT AGTTTCAGCT
GATATCATCA CTGGTAAAAA GACGATACTT GACTATCTGC TAAAACCTAT CTTAAAAGCA
AAACAAAACG CTTTAACGGA GCGATAA
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| Protein sequence | MQEDIKNQQN ENLKPDEKPV QKSDIKDQES AGDQILNSVD GIKSNIQAKN YDAYDLKFMS
SLSEAVLAKA PSTSKKILYA VSITVFWLLL WASWAQIDEI TRGSGKIIPS GKNQAIQNLE
GGIVDQIFVK EGDEVKKDQI LIRLDNKNFT SSYGESKLRL DELQAKFMRL DAEANDKEFD
YNETRDANNS KAVRYEISLH NSNIDHLNEQ IGILTEQIHQ RQSELTELRN KISQTQNSYN
LVLKEKAIME PIFKKGLVSE VEYIQLQRRV NDLKGELDAS VLAVPRVEST IKEAKNKIEE
AKLAFKNNAK KELNEVSAEI ARINESQISL SDRVERTYVR SPVNGIVSKM MVHTVSGVIK
PGENIAEIVP LEDKLIAEVK VKPADVAFLR PGLDTMVKFT AYDFSIYGGL KGKVTQISAD
TETNEKTGES YYLVRIETEK NYLGSEEKPL RIKVGMIVSA DIITGKKTIL DYLLKPILKA
KQNALTER
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