Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0840 |
Symbol | |
ID | 5596716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 604547 |
End bp | 606247 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640929181 |
Product | cache domain-contain protein |
Protein accession | YP_001466489 |
Protein GI | 157164939 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.287851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTT CATCAAAAGT GACGATGATG ATCGTCTCGT CCCTACTGGT GCTTGGAGCC ATCTTAGTCT TTCTAAACAT TTACGAGCAA AACAAAGCGA TAGAATTTTC TACCAAACAG CTGACTGAAA CGGTCTTAGC CGACAAAAGG GCAGCTTTAA GTGAAGAGAT GGATATCGTC TCAAGCATTT TGCTAAAAAT TCAAGAGGTC TATGACGACG CAAACGAGAC CATTGAAGAT CAAAAAGAAG ATATCATCGA CTACCTCTCA AAAGCTAGAT TTGGCGATGG CAAGCTTGGC TACTTTAGTC TCTCAACAAT AGATGGAGTT GTTATTGCAA ACCCTGGCTT GCCTGAATTT AATGGACAAA ATAGGCTTGA TGCAACTGAC GCAAATGGCT ATAAATATGT AAAAGAGCTT ATCGAAAAGG CTAAGCAAAA TAGTAATGGA GACTTTGTAA ATTTTGTTGC GAAGTCAAAG GATGGCAATA CTATAAGAAA GATAGCACGT GGACAAAAGC TAAATTTATT TCATGAGGAT GTGCTTTTGA TGTCTGTTGT TGATCTTGAG GGTATGTATA AAGAGATAGA TAAAATTTCA GCTACCATGC AAAATGATGC CAATGCAAAC ACTACAAATT TCATCGTCAT AGCCGTCGTA GTTTTAATCA TCTCACTAAT AGTTGCCATG CTCTACTCTA AATTTTCTAT CACAAAACCG CTAAATGAGC TAATCTTGCG AGCTACAAAC CTCTCAAGTG GCGATGGCGA TCTAACAAGA AAACTAGAAG TCGTTGGCAA AGATGAGATA GCAAAAGCCA GCGAGGCTAT AAATAAATTT ATAGAAAAAG TAAGGGTTTT AATCGCCGAG GCAAAAGATA TCTCAAATGA AAACAGCTCC ATCGCAAATG AGCTTAGCTC AACCTCAGTC CAAACTGGTC GCGGGGTAGA AAACTCAAGC AAGATAGTTG AGGACGCTGG GAAGGATTGC ACTGAGATAC AATCATATAT GAAAGAGTCA ATAGAAGTTG CAAAAGGTGG CAAAGATGAC CTTCAAAAGG CGCTAAGCTA CGTTGATGAG ACGCTAAATA CCATCTCAAA TTTATCTTCA GAGATCGCTC AGACATCTGA TATTGAGAAT CAAATGGCTG GCAAGATCGA GCAGCTTAGC CGAGATGCCG AGCAGGTTAA ATCAGTCCTT GTGGTTATCA ACGACATAGC AGATCAGACA AATTTACTAG CCCTTAATGC AGCCATCGAA GCAGCACGTG CAGGAGAACA CGGACGTGGC TTTGCAGTCG TTGCAGATGA GGTTAGAAAG CTAGCTGAGC GCACTCAAAA GAGCCTCACT GAGATAAATG CAACTATCAA CGTCATCGTT CAAGCGATAA ATGAAAGTAG CGAGCAAATG AGTATAAACT CAAGGCAAAT AAGCGAGCTA ACAGGCGTGG CAAACAACGC GCAAAACACC ATAAGAGATA TGAGTGGTAT CATGAGATCA GCCATAGGAC TATCTGATAA AACTATAGAG GACTATATAA AGACTGGCAA GGATATTGAC GATATAGTAA AAAGCATGGA GGGCATAAGT CAAATTTCAT CTCAAAGCAC AAGAAGCGTA GAAGAGATAG CCTCAGCTGC TGAGCATCTA AACAAGATGA CAGATACGCT AAATGCAAAA CTTGGCGAAT TTAGAACTTG A
|
Protein sequence | MKISSKVTMM IVSSLLVLGA ILVFLNIYEQ NKAIEFSTKQ LTETVLADKR AALSEEMDIV SSILLKIQEV YDDANETIED QKEDIIDYLS KARFGDGKLG YFSLSTIDGV VIANPGLPEF NGQNRLDATD ANGYKYVKEL IEKAKQNSNG DFVNFVAKSK DGNTIRKIAR GQKLNLFHED VLLMSVVDLE GMYKEIDKIS ATMQNDANAN TTNFIVIAVV VLIISLIVAM LYSKFSITKP LNELILRATN LSSGDGDLTR KLEVVGKDEI AKASEAINKF IEKVRVLIAE AKDISNENSS IANELSSTSV QTGRGVENSS KIVEDAGKDC TEIQSYMKES IEVAKGGKDD LQKALSYVDE TLNTISNLSS EIAQTSDIEN QMAGKIEQLS RDAEQVKSVL VVINDIADQT NLLALNAAIE AARAGEHGRG FAVVADEVRK LAERTQKSLT EINATINVIV QAINESSEQM SINSRQISEL TGVANNAQNT IRDMSGIMRS AIGLSDKTIE DYIKTGKDID DIVKSMEGIS QISSQSTRSV EEIASAAEHL NKMTDTLNAK LGEFRT
|
| |