Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0605 |
Symbol | rho |
ID | 5596918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1171184 |
End bp | 1172527 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640929726 |
Product | transcription termination factor Rho |
Protein accession | YP_001467008 |
Protein GI | 157165083 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000783157 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA ACAACCAAAC CGAGCAAAGT GCTGCTCAAA ACACAAAAAC TACAAAAAAA CATCAAGCAT CAAGAACCCA CGTACCAGTC GACGGACACA AGATCGAAGA GCTAAGAACA CTTAGCTTAG ATGAGCTAGT GCAGATCGCA AATGGCGTTG GCGTCGAAAA TCCACGCGAA TTTCGCAGGC AGGATTTGAT ATTTGAGATA CTAAAAACCC AGACAAAACA AGGTGGCTTT ATACTATTTA CTGGAATTTT AGAGATCACA AACGAGGGCT ACGGCTTTTT AAGGGCTGTT GATGCAAATT TAAGCGACAG CTCAAACGAC GCTTATGTTT CAAACTCTCA GATCCGCAAA TTTGCACTTC GTGTGGGCGA CATCATCACC GGCCAAGTAA GAGAGCCAAA AGATCAGGAA AAATACTACG CTCTTTTAAA GATCGAAGCG GTAAACTACA TGCCTCTAGC AGATGCAAAA GAGAGGCCAC TCTTTGACAA CTTAACCCCA CTTTTCCCAA CCGAAAAGCT AAATTTAGAG TATGATCCGA TGAAGCTAAC GGGCCGTGTG CTTGATCTTT TCACGCCTAT TGGCAAGGGT CAGCGTGGCC TCATCGTCGC ACCTCCAAGA AGCGGTAAAA CTGAGCTTAT GAAAGAGCTA GCTCACGGCA TCGCTAAAAA TCACCCAGAA GCCCAGCTAA TGGTGCTTCT AGTCGATGAA AGACCAGAAG AAGTTACAGA CATGCAGCGC TGCGTAAAAG GCGAGGTATT TAGCTCGACA TTTGACCTGC CAGCGCTTAA CCACGTCCGC GTGGCAGAGC TTGTCATCGA AAAGGCAAAA CGTCTAGTTG AGATGGGCAA AGACGTCATC ATTTTGCTTG ATAGCATAAC CCGTCTAGCA CGCGCCTATA ACACAGTGAC CCCGCCAAGC GGCAAGGTGC TAACAGGCGG CGTGGACGCA AACGCACTTC ACAAGCCAAA ACGATTCTTT GGCGCAGCTA GAAACATCGA GCACGGCGGC TCACTAACCA TCATCGCAAC CGCGCTAATC GACACTGGCT CACGTATGGA TGAAGTGATA TTTGAAGAGT TTAAGGGCAC TGGAAACAGC GAGATCGTGC TTGACCGCAA CATCTCAGAC CGCAGAATTT ACCCAGCTAT CAACGTGCTA AAATCAGGCA CAAGAAAAGA AGAGCTACTT CAAAAACCTG ATGAGCTTCA AAAAATTTGG GCTATCCGCT CTGCGATCGC GACAATGGAC GACGTCGAAG CACTTAAATT CTTATACGCA AAAATGCTAA AAACAAAAGA TAATAAAGAG CTTCTCTCTA TCCTAAACGA GTAA
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Protein sequence | MENNNQTEQS AAQNTKTTKK HQASRTHVPV DGHKIEELRT LSLDELVQIA NGVGVENPRE FRRQDLIFEI LKTQTKQGGF ILFTGILEIT NEGYGFLRAV DANLSDSSND AYVSNSQIRK FALRVGDIIT GQVREPKDQE KYYALLKIEA VNYMPLADAK ERPLFDNLTP LFPTEKLNLE YDPMKLTGRV LDLFTPIGKG QRGLIVAPPR SGKTELMKEL AHGIAKNHPE AQLMVLLVDE RPEEVTDMQR CVKGEVFSST FDLPALNHVR VAELVIEKAK RLVEMGKDVI ILLDSITRLA RAYNTVTPPS GKVLTGGVDA NALHKPKRFF GAARNIEHGG SLTIIATALI DTGSRMDEVI FEEFKGTGNS EIVLDRNISD RRIYPAINVL KSGTRKEELL QKPDELQKIW AIRSAIATMD DVEALKFLYA KMLKTKDNKE LLSILNE
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