Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0556 |
Symbol | |
ID | 5597684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1565020 |
End bp | 1565862 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640930113 |
Product | peptide methionine sulfoxide reductase MsrA/msrB |
Protein accession | YP_001467392 |
Protein GI | 157164442 |
COG category | [S] Function unknown |
COG ID | [COG3878] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.565002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCTAA ATGAAATTTA TAAAGGCTGC AAAGAGCGCG GTTTAGAGGG ACTTTTTGAG TTTTTAAAGC CAATGGCCAA AAATGCTATA AAGATAGATA CGCAGGCTAA AGATGACGGT GATATCGCTG TTGGAGCGTC TAAATTTGGC GGACAGCCAG ACCTGCCAGT TAGCGTGCCT TGGCCATCAA ATGAAAATGG CGCGCTTAGC TTTGTGGCAC AGATAAATTT CGCTGAAGTT AGCAAATTTG ACACCGACGG GTTACTACCA AAAAGTGGCA TGCTCTATCT TTTTTATGAT ATAAATTTAC GCATTTGGGG TTACGACCCT GCCGATAAAA AGGGCTTTGC TGTGATCTTT AGTGAGGCAG CTCAAGACCA GCTTGTTCGA CAAAACGTGG ATAGCGGAAA TTTCACATTT GGCGCGCGAT CTCTTGGCTT TAGGAGCGAG CTAAATTTGC CAAGTTTGCA AAGCTCGCTC GTGCCATTTG GTAAATTTAG CGAGGAGGAG TGGGAGGCCT ATCACGAGGT CATCGAGCCA AGCTGGCAGG CTAAAGAAAA CAAGCTACTT GGTCACTCTG ACAATATCCA AGACGGCATG GAGCTAGAGT GCGAGCTCGT GGCAAACGGC CTTGACTGCG GCGATGGTAG CGCTTATCAC CACCCAAATA TCGCTGAGTT CGAGAAAAAT GCCGCCCAGT GGCAGCTGCT TTTGCAAATA GATAGCGACT GGGATAGCGA CATGGACTGG GACGGCGAGG GCAGAGTTTA TCTGTGGATA AAGAGGGACG ACCTGGCGGC GCGCGACTTT AGCAAGACGT GGCTAGTTTT GCAGACGAGC TAG
|
Protein sequence | MDLNEIYKGC KERGLEGLFE FLKPMAKNAI KIDTQAKDDG DIAVGASKFG GQPDLPVSVP WPSNENGALS FVAQINFAEV SKFDTDGLLP KSGMLYLFYD INLRIWGYDP ADKKGFAVIF SEAAQDQLVR QNVDSGNFTF GARSLGFRSE LNLPSLQSSL VPFGKFSEEE WEAYHEVIEP SWQAKENKLL GHSDNIQDGM ELECELVANG LDCGDGSAYH HPNIAEFEKN AAQWQLLLQI DSDWDSDMDW DGEGRVYLWI KRDDLAARDF SKTWLVLQTS
|
| |