Gene CCC13826_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0476 
Symbol 
ID5597178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1483320 
End bp1484090 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content39% 
IMG OID640930038 
ProductNhaD 
Protein accessionYP_001467317 
Protein GI157165458 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.336062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAC CAGTTTTGAT GTATCACCAC GTGCTTGAAA AGAGTGGATT TATCGCTAGT 
AGCGTGGATG AGTTTAGATC GCATATGAAA TTTCTAGCCG AAAATGGCTA TAAAACGCTA
AGTATAAATG AATTTATCGC ATACAAAAAA GGTGAGCTTG ATGTGCCTAA AAAGAGCGTT
TGTATAACAT TTGACGATGG CTGGATGGAC AACTATATCT ATGCCTATCC TATCGTGAAA
GAATTTGGAC TAAAAGCAAA TATATTTATA ATAACTGGCT GGATAGAGGC AGCGCAAAAG
GCCCATGAGA TGAGGCCTGC TAGCTTTTTA AACATAGGTC ACAACGAGTG CAAGAAGCTT
GCTCCAAGTA GGCCGCAAGA TGTGATCTTA AATTTAGAGC AGATCGAGAA GATGAAGGAC
TGCTTTTATT TTCATTCGCA TACGCACGGG CATTTTGATG GATATTTTGG ACAGCTTAGC
TTGGATGAAG AATTTGGTCT TTGCCGTGAG TTTATGAAGA AAAATTTTGG CTTTGAAGAT
GAGGCGCTTT GCTGGCCAAG AGGCAAATAT AGTGACGAGT ATCTAAGTGC TGCTAAAAAG
CATGGTTACA AGGCATTTTT CACAACGAAA CGCGGCATAA ACAAGGCCAA TGGCAACTTA
GAGGAGATAA AACGCATAGT GACAAAGCGC GATGAAAAAT GGCTTAAAAA GACTATGTTT
ATCTATCAAA ATGACTTTTT GGGATCTATT TATGCTTTTC TTAGGAGTTA G
 
Protein sequence
MSVPVLMYHH VLEKSGFIAS SVDEFRSHMK FLAENGYKTL SINEFIAYKK GELDVPKKSV 
CITFDDGWMD NYIYAYPIVK EFGLKANIFI ITGWIEAAQK AHEMRPASFL NIGHNECKKL
APSRPQDVIL NLEQIEKMKD CFYFHSHTHG HFDGYFGQLS LDEEFGLCRE FMKKNFGFED
EALCWPRGKY SDEYLSAAKK HGYKAFFTTK RGINKANGNL EEIKRIVTKR DEKWLKKTMF
IYQNDFLGSI YAFLRS