Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0476 |
Symbol | |
ID | 5597178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1483320 |
End bp | 1484090 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640930038 |
Product | NhaD |
Protein accession | YP_001467317 |
Protein GI | 157165458 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.336062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAC CAGTTTTGAT GTATCACCAC GTGCTTGAAA AGAGTGGATT TATCGCTAGT AGCGTGGATG AGTTTAGATC GCATATGAAA TTTCTAGCCG AAAATGGCTA TAAAACGCTA AGTATAAATG AATTTATCGC ATACAAAAAA GGTGAGCTTG ATGTGCCTAA AAAGAGCGTT TGTATAACAT TTGACGATGG CTGGATGGAC AACTATATCT ATGCCTATCC TATCGTGAAA GAATTTGGAC TAAAAGCAAA TATATTTATA ATAACTGGCT GGATAGAGGC AGCGCAAAAG GCCCATGAGA TGAGGCCTGC TAGCTTTTTA AACATAGGTC ACAACGAGTG CAAGAAGCTT GCTCCAAGTA GGCCGCAAGA TGTGATCTTA AATTTAGAGC AGATCGAGAA GATGAAGGAC TGCTTTTATT TTCATTCGCA TACGCACGGG CATTTTGATG GATATTTTGG ACAGCTTAGC TTGGATGAAG AATTTGGTCT TTGCCGTGAG TTTATGAAGA AAAATTTTGG CTTTGAAGAT GAGGCGCTTT GCTGGCCAAG AGGCAAATAT AGTGACGAGT ATCTAAGTGC TGCTAAAAAG CATGGTTACA AGGCATTTTT CACAACGAAA CGCGGCATAA ACAAGGCCAA TGGCAACTTA GAGGAGATAA AACGCATAGT GACAAAGCGC GATGAAAAAT GGCTTAAAAA GACTATGTTT ATCTATCAAA ATGACTTTTT GGGATCTATT TATGCTTTTC TTAGGAGTTA G
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Protein sequence | MSVPVLMYHH VLEKSGFIAS SVDEFRSHMK FLAENGYKTL SINEFIAYKK GELDVPKKSV CITFDDGWMD NYIYAYPIVK EFGLKANIFI ITGWIEAAQK AHEMRPASFL NIGHNECKKL APSRPQDVIL NLEQIEKMKD CFYFHSHTHG HFDGYFGQLS LDEEFGLCRE FMKKNFGFED EALCWPRGKY SDEYLSAAKK HGYKAFFTTK RGINKANGNL EEIKRIVTKR DEKWLKKTMF IYQNDFLGSI YAFLRS
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