| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0472 |
|---|
| Symbol | |
|---|
| ID | 5597004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1479675 |
|---|
| End bp | 1480379 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640930034 |
|---|
| Product | glycosyl transferase, group 2 family protein |
|---|
| Protein accession | YP_001467313 |
|---|
| Protein GI | 157165188 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0043058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGCG TTGTCATTTT GACTTTTAAC AGCGAAAAGT ACCTAAAAGA GGTGTTAGAG
AGCGCTAAAT TTGCTGATGA GATCATCGTG GTTGATAGTG GTTCAAAAGA TGGCACAAGG
CAAATTTGTG ATGGCTTTAG CAACGTGAAA TTTCACGAGC AAACATGGCT TGGATTTGGC
GCGCAAAAGC AAAAGGGCGT GGATCTAGCC AAAAACGAGT GGGTCTTTGT GCTTGATAGC
GACGAGGTGA TTACAAATGA GCTTAAAAAT GAGATCATTA GTACGCTAAA AGAGCCTAAA
TTTATGGCTT ACAACGTTGC TAGGCTAAAT TTTTTCTTTG GCAAAGCGAT AAAAAACATG
GGGCTATATC CAGACTACAC GGTGAGGCTT TTTAATAAAA ATTTTGCCAA ATTTGATGGC
AGAGCTGTGC ATGAAAAGGT TGTTTTAAAT GACGGCTCAC AAAGGCTTGG CGCGCTTAAA
AATCACTTCT TGCACTACGC GTATGAGAGC ATCGAGCAGT TTATCGCCAA GCAAAATCGC
TACTCAAGCA TGGGCGCAAA AAGAAATTTG CTAAAGGCAC TTACAAGCCC TGCTTGGACA
TTTTTTAAGC TTTATGTGCT AAAAGGTGGC TTCAAAGAGG GCTTTACGGG CTACATTATC
GCCAGACTTT ACGCCCAGTA CACATTTTGG AAATATATAA AATGA
|
|---|
| Protein sequence | MLSVVILTFN SEKYLKEVLE SAKFADEIIV VDSGSKDGTR QICDGFSNVK FHEQTWLGFG
AQKQKGVDLA KNEWVFVLDS DEVITNELKN EIISTLKEPK FMAYNVARLN FFFGKAIKNM
GLYPDYTVRL FNKNFAKFDG RAVHEKVVLN DGSQRLGALK NHFLHYAYES IEQFIAKQNR
YSSMGAKRNL LKALTSPAWT FFKLYVLKGG FKEGFTGYII ARLYAQYTFW KYIK
|
|---|
| |