Gene CCC13826_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0355 
Symbol 
ID5597124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand- 
Start bp1047378 
End bp1047791 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content41% 
IMG OID640929603 
Productnickel responsive regulator 
Protein accessionYP_001466894 
Protein GI157164777 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000375481 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTG TTATACGTTT TAGTGTTTCT TTGCCTAGTC AATTACTAGA CGAACTAGAT 
AGAAAAGTTA GCGAACAAGG CTACGCTTCT AGGAGTGAAT TTACAAGGGA TTTGATCCGT 
GAAAAGATCG TAAACGATAG CTGGAAGGAC GCTGACGAGG AGTTGATTGG GGTTTTGACG 
CTCATTTATG TGCATCATCA CAACGATTTG GTGAATAAAA AAATGGATAT CGAGCATGAC 
TCTGATGTGA AGATCATCTG CACAAATCAC GTTCATGTCG ATCACCACAA CTGCTTAGAA 
ACGATCTCGA TAAGAGGTGA GGCTAGCAAG ATAGAGCGCT TTGCTGACAG GATTGCTGGC 
TTAAAGGGTG TTAAGTTTTC TAAACTTACA AAGGCCGCTG TGCCTAAATT TTAA
 
Protein sequence
MDSVIRFSVS LPSQLLDELD RKVSEQGYAS RSEFTRDLIR EKIVNDSWKD ADEELIGVLT 
LIYVHHHNDL VNKKMDIEHD SDVKIICTNH VHVDHHNCLE TISIRGEASK IERFADRIAG 
LKGVKFSKLT KAAVPKF