| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0327 |
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| Symbol | patB |
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| ID | 5596392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1917917 |
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| End bp | 1919083 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930469 |
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| Product | aminotransferase, class II |
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| Protein accession | YP_001467739 |
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| Protein GI | 157164929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0342316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACG ATTTTGACAC ATTAGTAAGC AGAGAAGGCA CCAACTCATC AAAATGGCGT
ATGAAGAGCG ATGTTTTGCC GATGTGGGTT GCAGATATGG ACTTTAAGGC CGCACCTGAG
ATCTTAAGCG TCTTGCAAAA GCGCCTTGAT AACGGCGTCT TTGGCTACTC TTTCATCCCA
AAAGAGTGGA ACGAAGCGAT AAAGAGCTGG TGGCAAAGAC GTCACAATGT GAGCTTTGAA
AACGAGTGGA TGTGCTTTTG CACTGGCGTC ATACCAGCTA TCTCGACTGC CATTAGGAGA
TTTAGCAGCC CTGGGGATCA AATTTTAGTG CAAGCGCCTG TCTATCACGT ATTTTTTAAC
TGCATCAAAA ACAATGGACG TGAAATTTTA TCAAACGACC TCGTCTATAA AAATGGCTCT
TATGAGATCG ACTTTGACGA CCTAGAGGCA AAGCTAGCTC AGCCGCTAAC TACCATGATG
CTTCTATGTA ATCCTCACAA TCCAATAGGC AAAATTTGGG ACAAAGAGAC GCTTAAAAAG
ATAGGAGAGC TTTGCTACAA GCACGATGTT TTGGTCATTA GCGATGAAAT TCACTGCGAC
ATAACCGACC CTGCGACTAG CTACGTGCCA TTTATCAGCG TGAGCGAGGA GTGCAAGAAT
AACTCCATCA CGTGCATCTC GCCTACAAAG GCCTTTAACA TAGCTGGCCT TCAAAGCTCA
GCCGTCGTCA CGCCAAACGA AAAGATCAGA TCAAGGCTAA ATGCCGCTAT CAACTACGAT
GAGGTTGGCG AGGCAAATGC CTTTGCGATC ATCGCCGCAA TCGCTGCGTT TAACGAGGGC
GAAGCGTGGC TTGATGAGCT TAGAGAGTAT CTTTTTGAAA ACAAAAAGGT CGTCGCAAAC
TTCATAAAAG AGCAGGGCTT GCCAGTGAAG CTTTTACCAT CAAGTGCGAC CTATCTTTTG
TGGCTTGACT GCAGTGCGTT TTGTGAGGAT TCGAGTGAGT TTATGAATTT CTTGCGCGAT
AAAGCCGGAC TTTGGCTAAA TGACGGCAAC GCTTACAGGG GGGATAGATT TTTCCTTCGT
ATGAATATCG CAACGCAGCG TGAAAGGGTG CTTGAAGGGC TAAAACGCTT GCAAAATGGG
ATAAATTTAT ACACTTCAAA GAGATGA
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| Protein sequence | MKYDFDTLVS REGTNSSKWR MKSDVLPMWV ADMDFKAAPE ILSVLQKRLD NGVFGYSFIP
KEWNEAIKSW WQRRHNVSFE NEWMCFCTGV IPAISTAIRR FSSPGDQILV QAPVYHVFFN
CIKNNGREIL SNDLVYKNGS YEIDFDDLEA KLAQPLTTMM LLCNPHNPIG KIWDKETLKK
IGELCYKHDV LVISDEIHCD ITDPATSYVP FISVSEECKN NSITCISPTK AFNIAGLQSS
AVVTPNEKIR SRLNAAINYD EVGEANAFAI IAAIAAFNEG EAWLDELREY LFENKKVVAN
FIKEQGLPVK LLPSSATYLL WLDCSAFCED SSEFMNFLRD KAGLWLNDGN AYRGDRFFLR
MNIATQRERV LEGLKRLQNG INLYTSKR
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