| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0294 |
|---|
| Symbol | pcm |
|---|
| ID | 5595689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1937084 |
|---|
| End bp | 1937734 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640930501 |
|---|
| Product | protein-L-isoaspartate O-methyltransferase |
|---|
| Protein accession | YP_001467766 |
|---|
| Protein GI | 157164175 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTAGGA TAGAAATTTT GACCCCATTA GAAGCGATAA AATGCCAAAA TTTAGCTAGC
GACATAGCCG ATGAGATCAC GCTAAGTCCG CTTTTATTTG ACGCGATATC AACAACTGAG
CGTGAAATTT TCGTGCCCAT CCCGGCACAT GCTTACAAGC TTGACGCGCA GCCGATACTG
GGCAACCAAT GGATCAGCTC GCCACTAACG GTGGCAAAGA TGACCATGGC GCTAGAGTGC
GAAAATGTGG ATAACATCCT AGAAATAGGC TGTGGTAGCG GCTATCAAGC AGCGATACTA
AGCAAGCTCG CACATAGAAT TTTTAGCGTC GAGCGCATAG AAAAGCTAGC CATGGAGGCC
AAAAAACGCT TCGAGGCGCT AAAGATCAAA AACGTGCACG TAAGATATGA TGATGGCAAC
AACGGCTGGC GAAGCTACGC GCCGTTTGAT AGGGTTTTAC TCTCGGCTGC TGCTGATGAG
ATCTCGCCAA ATTTATTTAG CCAGCTAAAA AATGGCGGCA TCTTGGTTGC TCCGATGAAA
AAAGATGGCA AGCAGTTTAT CGCTAAATTT AGAAAAGACG AGAGTGGAAA TTTAGAAAAA
GAGTTTTTAG ACGAGTGCCT TTTTGTGCCA CTTCTTGAAG GCAGAGAGTA G
|
|---|
| Protein sequence | MFRIEILTPL EAIKCQNLAS DIADEITLSP LLFDAISTTE REIFVPIPAH AYKLDAQPIL
GNQWISSPLT VAKMTMALEC ENVDNILEIG CGSGYQAAIL SKLAHRIFSV ERIEKLAMEA
KKRFEALKIK NVHVRYDDGN NGWRSYAPFD RVLLSAAADE ISPNLFSQLK NGGILVAPMK
KDGKQFIAKF RKDESGNLEK EFLDECLFVP LLEGRE
|
|---|
| |