Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0225 |
Symbol | lysS |
ID | 5597172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 1635796 |
End bp | 1637307 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640930184 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001467461 |
Protein GI | 157165521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATATTTG ACAACCAACA CGAAATTCAA AGATTAGAAA GCATAGATGA GCTTAGAAAT TTAGGCATAA ATCCGTATCC ACATTTTCTT AGAAGAGATA TGAATATCTC TAAATTTAGA CTTAAATTTA ACTATATAAA AGATACAGAA GAGAAAAAAG CAGAGGGGCA GCTAGTTGGC CTTGCAGGCA GGATAAAGCT GATCCGCGAC GCCGGTAAAG CGGTCTTTGC AAACATCGAA GACGAAAATG GAAATTTACA AATTTATTTT AGCAACAAGA CGCTTGATCC AGAGTGGTTT AAAATCGTTA AAAAATATGT AGAAATAGGC GACATTGTCT ATGTTAGAGG CTACGCTTTT ATAACAAGAA CTGGCGAATT TTCAATGCAC GTAAATGAGC TTAGCTTAGC TACAAAATCA ATTAGTCCGC TTCCTGAGAA GTACCACGGG CTAGTTGATG TTGAGACAAG ATACCGCCAA AGATACCTTG ATATGATAAT GAACCCTGAA GTTAGGGCTG ATTTTAAAAA GCGCTCGGTG ATTATAAGCA CGATTAGAAG ATTTTTTGAA GAAAAGGGCT TTTTAGAGGT TGAAACTCCG ATGCTTCACC CAATAGCAGG CGGCGCAAAT GCAAAGCCAT TTGTGACATT TCACAACGCC CTTGGAGTTG AGAGATACCT AAGAATCGCT CCCGAGCTAT ATCTAAAACG CCTTGTAGTT GGCGGCTTTG AAGCTGTTTA TGAGATGAAT AGAAACTTCA GAAACGAGGG CATGGATCTA ACCCACAACC CTGAATTTAC AAGTATCGAG TTTTACTGGG CATATCATAA CTACCACGAT CTAATGGGCA TCACAGAGGA TCTATTTAAT GTCATTTTAG AAAAGCTTGG CATGGAGAAA GTGATAAATT TTGATGGTAT GGAGATTGAT TTTAGCAAGC CATTTAAACG CATAAGCTAT AAAAAAGCTC TAGTTGAGAT CGGCGGACTT GCTGAAGATA TCGTAAGCGA TAAGGCTAAA ATTTTAGCAA AACTAAGAGC TGATGGCTTT GAAGCAAACG AGAAACTTGA CCTTGGCCAC TTGCAGGCTG AACTCTTTGA CAACTACGTG GAGAGCAAGC TCATCCACCC AACTTTTGTC ATCGACTATC CGATCTCTAT AAGCCCACTT TCAAGAAGAA GCGACACAAA TCCTGATGTG GCAGAGAGAT TTGAGCTATT TATCGCTGGT CGTGAGCTAG CAAATGGCTT TAACGAGCTA AACGATCCAA TCGATCAATA CAACCGCTTT AAAGCGCAAA TCGATGCCAA AAATGCAGGC GATGACGAGG CTCACGAAAT GGATGAAGAC TATGTAAAAG CCCTAGGATA CGGCATGCCA CCAGTTGCAG GCGAAGGCAT AGGCATCGAT AGGCTTGTGA TGCTTCTAAC AGATAAAAAA TCAATCCGCG ACGTTGTCCT CTTCCCAGCG ATGAGGCCAC TAAAAACTGA GATAAAGGAG AACGAAAAAT GA
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Protein sequence | MIFDNQHEIQ RLESIDELRN LGINPYPHFL RRDMNISKFR LKFNYIKDTE EKKAEGQLVG LAGRIKLIRD AGKAVFANIE DENGNLQIYF SNKTLDPEWF KIVKKYVEIG DIVYVRGYAF ITRTGEFSMH VNELSLATKS ISPLPEKYHG LVDVETRYRQ RYLDMIMNPE VRADFKKRSV IISTIRRFFE EKGFLEVETP MLHPIAGGAN AKPFVTFHNA LGVERYLRIA PELYLKRLVV GGFEAVYEMN RNFRNEGMDL THNPEFTSIE FYWAYHNYHD LMGITEDLFN VILEKLGMEK VINFDGMEID FSKPFKRISY KKALVEIGGL AEDIVSDKAK ILAKLRADGF EANEKLDLGH LQAELFDNYV ESKLIHPTFV IDYPISISPL SRRSDTNPDV AERFELFIAG RELANGFNEL NDPIDQYNRF KAQIDAKNAG DDEAHEMDED YVKALGYGMP PVAGEGIGID RLVMLLTDKK SIRDVVLFPA MRPLKTEIKE NEK
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