Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0177 |
Symbol | nhaC |
ID | 5597148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | + |
Start bp | 670162 |
End bp | 671577 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640929244 |
Product | Na+/H+ antiporter NhaC |
Protein accession | YP_001466547 |
Protein GI | 157164934 |
COG category | [C] Energy production and conversion |
COG ID | [COG1757] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.286543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAACT CTACAAAAAA AGAGCCTTCG TTTCTGCTAG CCCTTACACC TATCTTGGTT ATGATCGTAG GTCTTGCGCT TGGCGTTGGT TATATGAAGC TAAAGGTTGA GCCGATCATT TTGATAGCAG CCCTCGTGGC TGGTGGCATC GCTTGGAGGC TAGGATATAG TTGGAGCGAG CTTCAAGAAG GGGTAATAGA GAAAATTTCA AGCTCATTGC CAGCACTTAT GATACTTTGG GCAGTCGGTC TGCTTATTGG TTCATGGGTA TTTTCAGGTA CCATCCCTAT GATCATCTAC TACGGCGTAG ATCTTATAAG TCCGCAGTAT CTAGTCCTAA CTGCTTTTGT CATCGCAGCT ATCATTTCAA CCGTAACTGG CACATCTTGG GGTTCTGCTG GCACAGTCGG TGTCGCCATC ATGGGCATAG CTCAAGGTCT TGATGTAAAT TTAGCAGCAA CTGCTGGTGC GGTAGTTGCA GGAGCATACT TTGGCGATAA GCTCTCCCCG CTCTCAGACA CGACAAACCT AGCCCCGATA GCAGCTGGCT CAGAGCTTTA TGAGCACATC AGACATATGT TTTATACGAC TATCCCAGCA ACTATCGTTG CGATAGCGGC TTATCTATTC TTTGGTAGCG AGGCTGCAAG TAGTGGTGCA AATGTTTCAG AGTCGGTTTT GGCGCTTCAA GGTCAGCTTG ATAAAATTTT TCACTGGAAC ATCATCTTGC TTTTGCCTGT GCTTTTTGTC TTGGCTGGCT CGGTGCTAAA GTGGCCAACG ATACCTGTCA TGATCATCGC TTCGCTATTT TCAGTGCTTC TTGGTGTTAT CGTTCAAGAT TTTAGCTTTA AAAATGGCTT TATCTCAGTG ATGACTGGCT TTAACGTCAC GATGAGTGGC ATTAATATGG AGTTTTCAAA GGATATCACT AAGCTTCTAA ACAGAGGCGG CGTGAGCTCG GTAAATTCAA CCACTATCCT AGTTATCTGC GCTATGGGCT TTGCTGGCAT CATCTCAAAA ACTGGCATGC TTACAAAGGT ACTTCACACC ATTATGGCAA GGGTTAAATC AACAGCAGGA GTCATCATCT CGACTATCGG CTCATGCCTA ACCGTCGCAT TTGTCACAGG TAGTTCATAT CTTTCTATTC TCATCCCTGG TGAGATGTTT AAAGACTTTT ATAAAGAGAA AAATTTAGCA GCCAAAAACC TATCAAGAAC GCTTGAAGAC TCTGGCACCG TGATCGTCCC ACTCATCCCT TGGTCAGCAG CTGGCGCATA CATGACAGCA ACACTTGGAG TGCCAACGGT AGAGTATTTG CCATGGGCGA TACTAAACTA CATGGGCGTT GTCTTTGCTA TCATTTTAGC ACTCACTGGC ATTGGCATAG CTAAGATAAA TAAGGATGCC AAATGA
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Protein sequence | MMNSTKKEPS FLLALTPILV MIVGLALGVG YMKLKVEPII LIAALVAGGI AWRLGYSWSE LQEGVIEKIS SSLPALMILW AVGLLIGSWV FSGTIPMIIY YGVDLISPQY LVLTAFVIAA IISTVTGTSW GSAGTVGVAI MGIAQGLDVN LAATAGAVVA GAYFGDKLSP LSDTTNLAPI AAGSELYEHI RHMFYTTIPA TIVAIAAYLF FGSEAASSGA NVSESVLALQ GQLDKIFHWN IILLLPVLFV LAGSVLKWPT IPVMIIASLF SVLLGVIVQD FSFKNGFISV MTGFNVTMSG INMEFSKDIT KLLNRGGVSS VNSTTILVIC AMGFAGIISK TGMLTKVLHT IMARVKSTAG VIISTIGSCL TVAFVTGSSY LSILIPGEMF KDFYKEKNLA AKNLSRTLED SGTVIVPLIP WSAAGAYMTA TLGVPTVEYL PWAILNYMGV VFAIILALTG IGIAKINKDA K
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