| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0161 |
|---|
| Symbol | sodC |
|---|
| ID | 5597545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 854003 |
|---|
| End bp | 854539 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640929423 |
|---|
| Product | copper/zinc superoxide dismutase |
|---|
| Protein accession | YP_001466718 |
|---|
| Protein GI | 157165326 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2032] Cu/Zn superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000919214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCGTTTTACT AAGTGCAGTT TTAGGAACTT TGCTTTTTGC TCACGAGGGT
CATCACTTTG ATCCAAAGGC TGGCGAGCAT CTTGTGATCC CAGTTAGCGA ACTAAGCGAA
AAGGGCGATA AGAGCGTTGG CGAAGTAGTA GCTGTTAAGA CAAACTACGG CGTTGCGTTT
TTTCCAAATT TAAAAGGTCT TCCTGCAGGA CTTCACGGCT TTCACGTTCA TCAAAATGCT
GATTGTGGCG CGACTGAGAA AGGTCTAGGT ATGAAAGCGG GCGGTCACTG GGATCCAGCT
GAAACAAAGA TGCACTCATT TGCATGGGAC GATAAGGGTC ACAAAGGCGA TCTACCAGCA
CTTTACGTAG ACACTGAGGG CAATGCAAAC TATCCAGTGC TAGCTCCAAA GATAAAAAAC
CTTGACGAGC TAAAAGGTCA CTCACTGATG GTTCACGTCG GTGGCGATAA CCACAGTGAC
CAACCAAAAG CACTTGGCGG CGGCGGCGCT AGAATGCTTT GCGGCGTTAT TAAGTAA
|
|---|
| Protein sequence | MKKIVLLSAV LGTLLFAHEG HHFDPKAGEH LVIPVSELSE KGDKSVGEVV AVKTNYGVAF
FPNLKGLPAG LHGFHVHQNA DCGATEKGLG MKAGGHWDPA ETKMHSFAWD DKGHKGDLPA
LYVDTEGNAN YPVLAPKIKN LDELKGHSLM VHVGGDNHSD QPKALGGGGA RMLCGVIK
|
|---|
| |