Gene CCC13826_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0101 
Symbol 
ID5596215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1054475 
End bp1055680 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content44% 
IMG OID640929608 
Productputative periplasmic protein 
Protein accessionYP_001466899 
Protein GI157164810 
COG category[C] Energy production and conversion 
COG ID[COG1740] Ni,Fe-hydrogenase I small subunit 
TIGRFAM ID[TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTTT TAAAAAAAGA TAAGATACAA AATAAACAAA TTTCAAATGA AGGAGCTTAT 
ATGAATAATG ACTTGCGTCA AAAGATAAAT AGACGCTTAA GCGAACTTAG TGCATTGTCT
AAGATGAAAA ATGACACTAG TATTGCGCAG CTTTTAAAAG ATAAGGGCTT TACTAGGCGT
GATTTTATGA AGTGGGCTGG TGCGATGACA GCTTTTATGG CATTGCCAAG TGCGATGACA
CCGATGGTTG CTCGTGCTGC TGAGCTAAGT GATAGGCTCC CTGTGATATG GCTTCACATG
GCAGAATGCA CTGGCTGTAG CGAGGGCTTG CTAAGAACTG ACGCTCCAAG CATAGATAGC
CTTATATTTG ACTACATAAG CCTTGAATAC CACGAAACTA TCATGGCAGC TGCTGGCTGG
CAGGCTGAAG AAAATTTAGA GCATGCGATA GAAAAATATA AAGGCAGATA CATCTTGCTA
GTTGAAGGTG GCGTTCCAAC TGGAGCTACT GAGCACTTTT TAACAGTCGG ACCTCACGGC
ACAAGCGGCA AAACTCACGC TGTAAATGCC TCTGCTAACG CTGCTGCTAT CTTTGCTATT
GGCACCTGTT CTAGCTTTGG CGGTATCCAA GCAGCTAAGC CAAATCCAAC AAATTCAGTC
GGTCTTTCAA AGGTGACTGA TAAGCCCGTC ATAAACGTAC CAGGCTGTCC TCCAAGCGAG
AAAAACATCG TTGGCAACGT GCTTCACTAC TTGCTATTTG GCACTTTGCC TGCACTTGAT
GTTTATAACA GACCAAAATG GGCTTATGGC TTAAGAATTC ACGATCTTTG CGAAAGACGT
GGCCACTTTG ACGCAGGCGA ATTTGTCCAA AGCTTTGGCG ATGAAGGCGC AAAAAATGGC
TACTGCTTAT ACAAAGTAGG CTGTAAAGGC CCATATACAT TTAATAACTG CTCACGCGAG
AGATTTAATC AACACACATC ATGGCCAGTT CAAGCAGGTC ACGGCTGTAT AGGCTGCTCA
GAGCCAGACT TCTGGGATAC GATGGGGCCG TTTGAAGAGC CGATGGCTGA TAGGCTATTT
GACACTGTTT TAGGGCTTGG CGCTGATAAT GTAAGTGATA AGATCGGCAT TGGAATTTTA
GCACTTGCTG GTGTTGGCAT AGCGGCTCAC GCTGCACTAG CTTGTATGAG TAAAGATAAA
GAATAA
 
Protein sequence
MYFLKKDKIQ NKQISNEGAY MNNDLRQKIN RRLSELSALS KMKNDTSIAQ LLKDKGFTRR 
DFMKWAGAMT AFMALPSAMT PMVARAAELS DRLPVIWLHM AECTGCSEGL LRTDAPSIDS
LIFDYISLEY HETIMAAAGW QAEENLEHAI EKYKGRYILL VEGGVPTGAT EHFLTVGPHG
TSGKTHAVNA SANAAAIFAI GTCSSFGGIQ AAKPNPTNSV GLSKVTDKPV INVPGCPPSE
KNIVGNVLHY LLFGTLPALD VYNRPKWAYG LRIHDLCERR GHFDAGEFVQ SFGDEGAKNG
YCLYKVGCKG PYTFNNCSRE RFNQHTSWPV QAGHGCIGCS EPDFWDTMGP FEEPMADRLF
DTVLGLGADN VSDKIGIGIL ALAGVGIAAH AALACMSKDK E