Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_0093 |
Symbol | tgt |
ID | 5596725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 886174 |
End bp | 887304 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640929452 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001466747 |
Protein GI | 157164323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0899534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG AAGTTATAAA AAAAGATGGC AACGCAAGGC GCGGCATCCT AACAACCGCT CACAGCGTGA TACAAACGCC AGTTTTCATG CCAGTTGGCA CTGTTGGCGC AGTTAAAAGC CTAGACGCCT TTGATATGAG TGAAATTTTA GACGCAAAGA TAATTTTAGC AAACACCTAC CACATGTATC TGCGCCCTGG CAGCAAGGTC GTGCGTGAGT TTGGCGGACT TCACGGGTTT TCTAAATTTG ATCGCTCGTT TTTAACTGAT AGCGGCGGAT TTCAGGCATT TTCTCTTAGG TCAAATACCA AAAACGACGA TGGCGGGATA AAATTTAAAA GCCACATCGA CGGCAGCACG CACTACTTCA CTCCAAGGTC CGTCCTTGAT ACGCAGTATG AGCTTGGCAG CGACATAATG ATGATACTTG ATGATCTAGT CGCCTTGCCA GCTGAGCCAA AAAGGATAGA TCTCAGCATA AAGCGAACGA TAAAATGGGC AAAAGAGGCG ATTGATTATC ACAAATTTAT GCAAAGCAAG GGCGTTGGCT TGCAGCAAAA TATCTTTGGC ATCGTCCAAG GTGGCACCGA CTATGAGGCA CGTAAATTTT GCGCCGAGGC ACTAAACGAG ATGCCATTTG ACGGCCTTGC GATCGGCGGT CTAAGCGTTG GCGAGAGCAA CGAGGCGATG TATGACACGG TTGAGGCGGT TATGCCGTTT ATGGATGAGC TTAGACCACG CTATCTAATG GGCGTTGGCA CACCTGAAGA CCTTGTTGAA AACGTAGAGC GAGGCGTTGA TATGTTTGAC TGCGTCATGC CAACTAGAAA CGCAAGAAAT GGCACGCTAT TTACTAGCTT TGGCAAGATA AATATAAAAT CAGCCAAATT TATAAACGAC CACGCGCCGA TAGATCCGCA GTGTCAGTGC TATACCTGCA AGCGTTACTC CAGAGGCTAT CTAAACCACC TTTTTAAGGC TAGAGAGCTA ACGTTTTTTA GACTAGCAAG CCTTCACAAC CTGCACTACT ATCTAAATTT GATGAAAGAG ATGAGAGAGG CGATCGAGGT CGGCGAATTT GCTAAATTTA AGCGAAATTT CTACGCAAAA AGGAGCACAG ATGAGCTATA A
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Protein sequence | MKFEVIKKDG NARRGILTTA HSVIQTPVFM PVGTVGAVKS LDAFDMSEIL DAKIILANTY HMYLRPGSKV VREFGGLHGF SKFDRSFLTD SGGFQAFSLR SNTKNDDGGI KFKSHIDGST HYFTPRSVLD TQYELGSDIM MILDDLVALP AEPKRIDLSI KRTIKWAKEA IDYHKFMQSK GVGLQQNIFG IVQGGTDYEA RKFCAEALNE MPFDGLAIGG LSVGESNEAM YDTVEAVMPF MDELRPRYLM GVGTPEDLVE NVERGVDMFD CVMPTRNARN GTLFTSFGKI NIKSAKFIND HAPIDPQCQC YTCKRYSRGY LNHLFKAREL TFFRLASLHN LHYYLNLMKE MREAIEVGEF AKFKRNFYAK RSTDEL
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