| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0092 |
|---|
| Symbol | |
|---|
| ID | 5597021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 887383 |
|---|
| End bp | 888489 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640929453 |
|---|
| Product | MTA/SAH nucleosidase |
|---|
| Protein accession | YP_001466748 |
|---|
| Protein GI | 157165030 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0905172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAAGA GAAATGATAT CGTTTTTACC GAAGCAAACG GCACTGCGAC CATAAAATTT
GCAGGCGAGT TTAGCTATAA AGACGCAAAA AATTTACAAA GCATTTTTAA AAAAATCCAA
AAGCTTAAAG GCAATGTTAA ATTTGACTTT AGCGAGCTAA AGAGCATTGA TTATGCTGTT
TTGATCCTTT TAAAAAACAC GCTAAATGGC AAGAAATTTG AGATCATCAC AAATGATGAG
AAGATAAAGG CGATGAGCGA TCTTTTAAAT GACGAGAAGA TCGATTTTAA ATATATGCCG
CCTCACAATA GCCTAAATTT TTTCTCACGA TTGGGGGAGA AAATTTGCGA GGGATTTGTA
AATTTGCTTG AGTTTGGCTC GTTTTTGGGC GAGTTTTTGA TAAAGAGCGT AAGGATTTTA
TTTAATCCTG CAAATTTAAG GTTTAGAGAA TTTAGCAACT ATATAAAAGA TGGCGGCGTA
AATGCCGTTT TCATCGTATC GCTCACCGCT TTTTTGATAG GCGTTGTGCT TGCTTATCTT
GGCAGTGCGA TGCTTGCAAG CTTTGGGGCA AGTATATTTA TAGTTGAGAT CATGGGCATG
CTAACGCTTA GAGAGGTCGC TCCGCTCATC GCTGCTATCG TCGTGGCGGG CAGGTCGGCC
TCTAGCTTTA CTGCGCAAAT TGGCGCTATG AAGCTAACTG AGGAGATAGA CGCGATGAAG
ACGATGGGTT TTGAGCCATT TAACTTCTTG GTCTTGCCAC GCATCATCGC CATGGTGCTT
TGCGTGCCTG TCATCATCTT TATAGCTGAT AGCATAAGCA TCTTAGGGCA GATGATCATT
TGCCAAACGA TACTTGACAT CAGCTTTAGC GACTATCTCA ATAGATTTCG CGAGATGGTC
GAGCTTAGGC ACTTTGCTGT TGGTATGATA AAGGCTCCAT TTTTTGGCGC GGTAATTGCG
ATCATTGGCT GCATGAGGGG ATTTGGCGTT AGTCAAAACG CCCAAAGCCT TGGAGCGATG
ACAACCGTTA GCGTTGTAAA TGCGATATTT TGGGTCATTG CGCTTGATGC ATTTTTCGCG
ATAATTTTTA TGTGGCTAAA GATATGA
|
|---|
| Protein sequence | MQKRNDIVFT EANGTATIKF AGEFSYKDAK NLQSIFKKIQ KLKGNVKFDF SELKSIDYAV
LILLKNTLNG KKFEIITNDE KIKAMSDLLN DEKIDFKYMP PHNSLNFFSR LGEKICEGFV
NLLEFGSFLG EFLIKSVRIL FNPANLRFRE FSNYIKDGGV NAVFIVSLTA FLIGVVLAYL
GSAMLASFGA SIFIVEIMGM LTLREVAPLI AAIVVAGRSA SSFTAQIGAM KLTEEIDAMK
TMGFEPFNFL VLPRIIAMVL CVPVIIFIAD SISILGQMII CQTILDISFS DYLNRFREMV
ELRHFAVGMI KAPFFGAVIA IIGCMRGFGV SQNAQSLGAM TTVSVVNAIF WVIALDAFFA
IIFMWLKI
|
|---|
| |