| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0071 |
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| Symbol | secD |
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| ID | 5596097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1207921 |
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| End bp | 1209453 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640929768 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_001467050 |
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| Protein GI | 157164627 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTTTTG GTTTTGGCTT TTCGGTGCCA TCTTTTTTTC AGACTCAAAG CGGAGCTAAA
ATTTCGCTAG GACTTGACCT TCAAGGCGGT CTTCATATGC TTCTTGGTGT TGAAACTAAC
GAAGCCATCC ACTCTAAGAT CAAGTCAATC GCTGGAAGCA TAAATTATTA TGCCAAAAAA
GAAGATGTGC TCATTGATAA ATTTAAGATA AAAGAAGATA GTGTTGATTT TGCACTACTT
GATAGTGACG AGGCTCCAAA GGTTGATAAA GCGCTTGCTG AGATAAAAGG GCTTGATATC
AAAAAAGATG GCCTAAACTA TCACATCACT CTAACAGAGC AAGAGAGGAT TGATACGATC
GAGTATGCGA TCTCTCAAGC TGTTGAGACC ATTAGAAACA GACTTGATCA GTTTGGTTTA
GCTGAGCCAA CAGTTGCTAG ACAAGGTAAA GACAATATCC TAGTCGAACT TCCTGGCATA
AAGACTGAAG AAGATGAGCA AAGAGCGAGA GATCTTATTG CAAAGGCTGC TCACTTGCAG
CTTATGGCAG TTGATGACAA AAGACAAGAT CAGGCTAATA CGATGAGTGA GGCTGAGGCC
GAAAGCTATG GTGATGTGAT CTTTAAAGAT GCTAAAAATG ACCGAGTAAA ATACGTCGTT
AAAAATATCC CAGTGCTTGA TGGCTCGATG CTAACTGATG CAAAAGTAGC ATTTTCTCAG
CAAAATAACC TACCGATCAT AAATTTCACA CTAAATTCAG AAGGTGCTAG AATTTTTGGT
GATTTTACTG GCGCAAATGT GGGCAAAAGG CTTGCTATCG TGCTTGACGG CAAGGTCTAT
TCAGCTCCAG TTATAAACGA AAGAATAGGT GGTGGCAGCG GCCAGATCAG CGGTGGCTTT
ACCCTTGATG AGGCTCACGA CGTAGCGATC GCACTTAGAA GTGGCGCACT TTTAGCACCT
GTGAAGATGC TAGAAAAAAG AAGCGTTGGC CCATCTTTAG GCCAAGAGAG CATCAATCAA
AGCATGGTTG CTCTTGCTGC TGGATCTATT TTAGTCGTGC TATTTATGCT AGTTTATTAT
GGAATTTCTG GAATTTTTGC AAATATCGCG CTAGTTGCGG ACGTCGTTAT ATTGGTCGCT
GTTATGGCGC TTTTTGGAGC GACTCTTACG CTTCCAGGTA TGGCTGGTAT CGTGCTAACG
ATCGGTATGG CGGTTGATGC AAACGTCATC ATAAATGAAC GTATCCGTGA GCTTTTACGT
GAAGGCGTGG CGATAAGAAC AGCTGTTCAA AAGGGATATG AGCACGCTAT GAGTGCGATC
ATCGACTCAA ACTTAACTAC TATCATCACA GTTGCTGTGC TTTATGCTTA TGGCACTGGT
CCAGTTAAGG GCTTTGCTGT GACAATGGCG ATAGGAATCA TGGCTTCGAT GCTAACAGCC
ATTTTAGGCA CTCACGGCAT GTTTGATGCA GTCATGGATA AGATAGAAAA AAGCGGAAAT
ACCAGACTTT GGTTTGGTTA TAAAAGGAGC TAG
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| Protein sequence | MVFGFGFSVP SFFQTQSGAK ISLGLDLQGG LHMLLGVETN EAIHSKIKSI AGSINYYAKK
EDVLIDKFKI KEDSVDFALL DSDEAPKVDK ALAEIKGLDI KKDGLNYHIT LTEQERIDTI
EYAISQAVET IRNRLDQFGL AEPTVARQGK DNILVELPGI KTEEDEQRAR DLIAKAAHLQ
LMAVDDKRQD QANTMSEAEA ESYGDVIFKD AKNDRVKYVV KNIPVLDGSM LTDAKVAFSQ
QNNLPIINFT LNSEGARIFG DFTGANVGKR LAIVLDGKVY SAPVINERIG GGSGQISGGF
TLDEAHDVAI ALRSGALLAP VKMLEKRSVG PSLGQESINQ SMVALAAGSI LVVLFMLVYY
GISGIFANIA LVADVVILVA VMALFGATLT LPGMAGIVLT IGMAVDANVI INERIRELLR
EGVAIRTAVQ KGYEHAMSAI IDSNLTTIIT VAVLYAYGTG PVKGFAVTMA IGIMASMLTA
ILGTHGMFDA VMDKIEKSGN TRLWFGYKRS
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