Gene CCC13826_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_0035 
Symbol 
ID5596201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand
Start bp1241264 
End bp1241749 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID640929803 
Product3-isopropylmalate dehydratase small subunit 
Protein accessionYP_001467085 
Protein GI157164743 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02084] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.158163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAG GCAAAGTTTG GAAATTTGGC GATAACATCG ACACCGACAT CATCATCGCC 
GCAAGATATT TAAACACTTC AGACGAAAAA GAGCTAGCAA AACACATCAT GGAAGACGCT
GATCCTAAAT TTAGCTCAAA AATAGCAAAA GGCGACATCA TCGTAGCTGG CGAAAATTTT
GGCTGCGGCA GCTCAAGAGA GCACGCCCCA CTAGCGCTAA AAGAGGCTGG CATAGCAGCT
GTTGTGGCTA AGAGCTTTGC GAGGATTTTT TATAGAAATA GCTTTAACAC AGGGCTTTTG
ATACTTGAGA TAAAAGAGAC TGATGAGATA AACGAGGGTG ACACGCTAAA GATCGACGTA
GATAACGGCG TCATCATAAA TGAAAGCACA AAAAAAGAGT ATAAATTTAA CGCTATCCCG
CCATTTATGC AAGAGCTTTT AAACGCTGGC GGCCTTATTG AATACGCAAA AGCGAAGATG
AACTAA
 
Protein sequence
MKQGKVWKFG DNIDTDIIIA ARYLNTSDEK ELAKHIMEDA DPKFSSKIAK GDIIVAGENF 
GCGSSREHAP LALKEAGIAA VVAKSFARIF YRNSFNTGLL ILEIKETDEI NEGDTLKIDV
DNGVIINEST KKEYKFNAIP PFMQELLNAG GLIEYAKAKM N