| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0029 |
|---|
| Symbol | |
|---|
| ID | 5596493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1245423 |
|---|
| End bp | 1246439 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640929809 |
|---|
| Product | L-asparaginase |
|---|
| Protein accession | YP_001467091 |
|---|
| Protein GI | 157165109 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.304062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAG GTGCTACTTT AGCGGTTGCT AAGCCAACCA TCTACATCCT AGCTACTGGT
GGAACGATAG CTGGAAGCGG CTCAGGCTCG CTTGATTCAA GCTATACTTC TGGAACTGTT
ACGGTCGATA AACTTATCGC AGCCGTGCCA GATATCAACA AGATCGCTAC CATAAAAGGC
GAGCAAATTT CAAATATCGG TTCTCAAGAT ATGAACAACG AAGTTTGGCT TAAGCTTGCA
AATAGAATAA ATGAACTTCT AAATAGTGGC AAAGCTGATG GTATCGTTGT TACTCACGGC
ACAGACACTA TGGAGGAGAC AGCTTACTTT CTAAATTTAG TCGTTAAAAG CGACAAGCCA
GTTGTGCTTG TAGGTGCGAT GAGAAATAGC GGCTCACTAA GTGCAGACGG CCCACTAAAT
TTATTTAACG CTGTAAATGT AGCTATCAGC AAAGATAGCG TAGGCAAGGG CGTTGTAGTG
ACTATGAATG ATGAAATTCA CGCGGCTCGT GAGGTGACAA AAACTAACAC AACAGGCGTT
GATACATTTA AATCACCAAA CAGCGGCAAA ATCGGCACAG TCTTTTATGG CAACGTAAAA
TACTATATGA ATCCGCTCAG AAAACACACA GCAAGCTCAG CTTTTGACCT AACTGGCGTA
AAAGAGCTTC CAAGAGTTGA TATCATCTAC TCTCACGCAA ACGACAACCC TGACTTTGTA
AATGTGGCTG TTAAAAATGG CGCAAAAGGC ATAATTAGCG CTGGCCTTGG CAACGGCAAC
CCTTACTTTA GCGTGCTAGA GGCTCTTGGC GAGGCTTCAA AAGCTGGCGT AGTGGTAGTT
CGTGACTCAC GTGTGGGAAG CGGCGAGACA ACTATGAACG GCGAAGTTGA TGATGCAAAA
TACGGCTTTT TAACAAGCGA CAACCTAAAC GCTCAAAAAG CTAGAGTACT TTTGATGCTT
GCACTTACAA AAACAAGCGA CAAAGCTAAA ATTCAAGAGT TTTTCTTAAC TCACTAA
|
|---|
| Protein sequence | MILGATLAVA KPTIYILATG GTIAGSGSGS LDSSYTSGTV TVDKLIAAVP DINKIATIKG
EQISNIGSQD MNNEVWLKLA NRINELLNSG KADGIVVTHG TDTMEETAYF LNLVVKSDKP
VVLVGAMRNS GSLSADGPLN LFNAVNVAIS KDSVGKGVVV TMNDEIHAAR EVTKTNTTGV
DTFKSPNSGK IGTVFYGNVK YYMNPLRKHT ASSAFDLTGV KELPRVDIIY SHANDNPDFV
NVAVKNGAKG IISAGLGNGN PYFSVLEALG EASKAGVVVV RDSRVGSGET TMNGEVDDAK
YGFLTSDNLN AQKARVLLML ALTKTSDKAK IQEFFLTH
|
|---|
| |