| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_4914 |
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| Symbol | |
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| ID | 5586016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 4903891 |
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| End bp | 4904751 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640928515 |
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| Product | outer membrane usher protein FimD, truncation |
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| Protein accession | YP_001465842 |
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| Protein GI | 157154995 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCGC TTAACGTCAA TATTCCTTTC AGCCACTGGC TGCGTTCTGA CAGTAAATCT
CAGTGGCGAC ATGCCAGTGC CAGTTACAGC ATGTCACACG ATCTCAACGG TCGGATGACC
AATCTGGTCG GTGTATACGG TACGTTGCTG GAAGACAACA ACCTCAGCTA TAGCGTGCAA
ACCGGTTACG CCGGGGGAGG TGATGGTAAT AGCGGAAGTA CAGGCTACGC CACGCTGAAT
TATCGCGGCG GTTACGGCAA TGCCAACATC GGTTACAGCC ATAGCGATGA TATTAAGCAG
CTCTATTACG GAGTCAGCGG TGGGGTACTG GCTCATGCCA ATGGCGTAAC GCTGGGGCAG
CCGTTAAACG ATACGGTGGT GCTTGTTAAA GCGCCTGGCG CAAAAGATGT AAAAGTCGAA
AACCAGACGG GGGTGCGTAC CGACTGGCGC GGTTATGCCG TGCTGCCTTA TGCCACTGAA
TATCGGGAGA ACAGAGTAGC GCTGGATACC AATACCCTGG CTGATAACGT CGATTTAGAT
AACGCGGTCG CTAACGTTGT TCCCACCCGT GGGGCGATCG TGCGAGCAGA GTTTAAAGCG
CGCGTTGGGA TAAAACTGCT CATGACGCTA ACCCACAATA ATAAGCCGCT GCCGTTTGGG
GCGATGGTGA CATCAGAGAG TAGCCAGAGT AGCGGCATTG TTGCGGATAA TGGTCAGGTT
TACCTCAGCG GAATGCCTTT AGCGGGAAAA GTTCAGGTGA AATGGGGAGA AGAGGAAAAT
GCTCACTGTG TCGCCAATTA TCAACTGCCA CCAGAGAGTC AGCAGCAGTT ATTAACCCAG
CTATCAGCTG AATGTCGTTA A
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| Protein sequence | MLALNVNIPF SHWLRSDSKS QWRHASASYS MSHDLNGRMT NLVGVYGTLL EDNNLSYSVQ
TGYAGGGDGN SGSTGYATLN YRGGYGNANI GYSHSDDIKQ LYYGVSGGVL AHANGVTLGQ
PLNDTVVLVK APGAKDVKVE NQTGVRTDWR GYAVLPYATE YRENRVALDT NTLADNVDLD
NAVANVVPTR GAIVRAEFKA RVGIKLLMTL THNNKPLPFG AMVTSESSQS SGIVADNGQV
YLSGMPLAGK VQVKWGEEEN AHCVANYQLP PESQQQLLTQ LSAECR
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