Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4209 |
Symbol | gyrB |
ID | 5589170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4194467 |
End bp | 4196881 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640927825 |
Product | DNA gyrase subunit B |
Protein accession | YP_001465184 |
Protein GI | 157155879 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00242077 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATT CTTATGACTC CTCCAGTATC AAAGTCCTGA AAGGGCTGGA TGCGGTGCGT AAGCGCCCGG GTATGTATAT CGGCGACACG GATGACGGCA CCGGTCTGCA CCACATGGTA TTCGAGGTGG TAGATAACGC TATCGACGAA GCGCTCGCGG GTCACTGTAA AGAAATTATC GTCACCATTC ACGCCGATAA CTCTGTCTCC GTACAGGATG ATGGGCGCGG CATTCCGACC GGTATTCACC CGGAAGAGGG CGTATCGGCG GCGGAAGTGA TCATGACCGT TCTGCACGCA GGCGGTAAAT TTGACGATAA CTCCTATAAA GTGTCCGGCG GTCTGCACGG CGTTGGTGTT TCGGTTGTAA ACGCCCTGTC GCAAAAACTG GAGCTGGTTA TCCAGCGCGA GGGTAAAATT CACCGTCAGA TCTACGAACA CGGTGTACCG CAGGCTCCGC TGGCGGTTAC CGGCGAGACT GAAAAAACCG GCACCATGGT GCGTTTCTGG CCCAGCCTCG AAACCTTCAC CAATGTGACC GAGTTCGAAT ATGAAATTCT GGCGAAACGT CTGCGTGAGT TGTCGTTCCT CAACTCCGGC GTTTCCATTC GTCTGCGCGA CAAGCGTGAC GGCAAAGAAG ACCACTTCCA CTATGAAGGC GGCATCAAGG CGTTCGTTGA ATATCTGAAC AAGAACAAAA CGCCGATCCA CCCGAATATC TTCTACTTCT CCACCGAAAA AGACGGTATT GGCGTCGAAG TGGCGTTGCA GTGGAACGAT GGCTTCCAGG AAAACATCTA CTGCTTTACC AACAACATTC CGCAGCGTGA CGGCGGTACT CACCTGGCAG GCTTCCGTGC GGCGATGACC CGTACCCTGA ACGCCTACAT GGACAAAGAA GGCTACAGCA AAAAAGCCAA AGTTAGCGCC ACCGGTGACG ATGCGCGTGA AGGCCTGATT GCGGTCGTTT CCGTGAAAGT GCCGGACCCG AAATTCTCCT CCCAGACCAA AGACAAACTG GTTTCTTCTG AGGTGAAATC AGCGGTTGAA CAGCAGATGA ACGAACTGCT GGCAGAATAC CTGCTGGAAA ACCCAACCGA CGCGAAAATC GTGGTTGGCA AAATTATCGA TGCTGCCCGT GCCCGTGAAG CGGCGCGTCG CGCGCGTGAA ATGACCCGCC GTAAAGGTGC GCTCGACTTA GCGGGCCTGC CGGGCAAACT GGCAGACTGC CAGGAACGCG ATCCGGCGCT TTCCGAACTG TACCTGGTGG AAGGGGACTC CGCGGGCGGC TCTGCGAAGC AGGGGCGTAA CCGCAAGAAC CAGGCGATTC TGCCGCTGAA GGGTAAAATC CTCAACGTCG AGAAAGCGCG CTTCGATAAG ATGCTCTCTT CTCAGGAAGT GGCGACGCTT ATCACCGCGC TTGGCTGTGG TATCGGTCGT GACGAGTACA ACCCGGACAA ACTGCGTTAT CACAGCATCA TCATCATGAC CGATGCGGAC GTCGACGGCT CGCACATTCG TACGCTGCTG TTGACCTTCT TCTATCGTCA GATGCCGGAA ATCGTTGAAC GCGGTCACGT CTACATCGCT CAGCCGCCGC TGTACAAAGT GAAGAAAGGC AAGCAGGAAC AGTACATTAA AGACGACGAA GCGATGGATC AGTACCAGAT CTCTATCGCG CTGGATGGCG CAACGCTGCA CACCAACGCC AGCGCACCGG CATTGGCTGG CGAAGCGTTA GAGAAATTGG TGTCTGAGTA CAACGCGACG CAGAAAATGA TCAACCGCAT GGAGCGTCGT TATCCGAAAG CAATGCTGAA AGAGCTTATC TATCAGCCGA CGCTGACGGA AGCCGACCTC TCTGATGAGC AGACCGTTAC CCGCTGGGTG AACGCGCTGG TCAGCGAACT GAACGACAAA GAACAGCACG GCAGCCAGTG GAAGTTTGAT GTCCACACCA ATGCCGAACA AAACCTGTTC GAGCCGATTG TTCGCGTGCG TACCCACGGT GTGGATACTG ACTATCCGCT GGATCACGAG TTTATCACCG GTGGCGAATA TCGTCGTATC TGCACGCTGG GTGAGAAACT GCGTGGCTTG CTGGAAGAAG ATGCGTTTAT CGAACGTGGC GAGCGTCGTC AGCCGGTAGC CAGCTTCGAG CAGGCGCTGG ACTGGCTGGT GAAAGAGTCC CGTCGCGGCC TCTCCATCCA GCGTTATAAA GGTCTGGGCG AGATGAACCC GGAACAGCTG TGGGAAACCA CCATGGACCC GGAAAGCCGT CGTATGCTGC GCGTTACCGT TAAGGATGCG ATTGCCGCTG ACCAGTTGTT CACCACGCTG ATGGGCGACG CCGTTGAACC GCGCCGTGCG TTTATTGAAG AGAACGCCCT GAAAGCGGCG AATATCGATA TTTAA
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Protein sequence | MSNSYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNAIDE ALAGHCKEII VTIHADNSVS VQDDGRGIPT GIHPEEGVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV SVVNALSQKL ELVIQREGKI HRQIYEHGVP QAPLAVTGET EKTGTMVRFW PSLETFTNVT EFEYEILAKR LRELSFLNSG VSIRLRDKRD GKEDHFHYEG GIKAFVEYLN KNKTPIHPNI FYFSTEKDGI GVEVALQWND GFQENIYCFT NNIPQRDGGT HLAGFRAAMT RTLNAYMDKE GYSKKAKVSA TGDDAREGLI AVVSVKVPDP KFSSQTKDKL VSSEVKSAVE QQMNELLAEY LLENPTDAKI VVGKIIDAAR AREAARRARE MTRRKGALDL AGLPGKLADC QERDPALSEL YLVEGDSAGG SAKQGRNRKN QAILPLKGKI LNVEKARFDK MLSSQEVATL ITALGCGIGR DEYNPDKLRY HSIIIMTDAD VDGSHIRTLL LTFFYRQMPE IVERGHVYIA QPPLYKVKKG KQEQYIKDDE AMDQYQISIA LDGATLHTNA SAPALAGEAL EKLVSEYNAT QKMINRMERR YPKAMLKELI YQPTLTEADL SDEQTVTRWV NALVSELNDK EQHGSQWKFD VHTNAEQNLF EPIVRVRTHG VDTDYPLDHE FITGGEYRRI CTLGEKLRGL LEEDAFIERG ERRQPVASFE QALDWLVKES RRGLSIQRYK GLGEMNPEQL WETTMDPESR RMLRVTVKDA IAADQLFTTL MGDAVEPRRA FIEENALKAA NIDI
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