Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_4061 |
Symbol | xylA |
ID | 5586302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 4042152 |
End bp | 4043474 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640927681 |
Product | xylose isomerase |
Protein accession | YP_001465041 |
Protein GI | 157157106 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCCT ATTTTGACCA GCTCGATCGC GTTCGTTATG AAGGCTCAAA ATCCTCAAAC CCGTTAGCAT TCCGTCACTA CAATCCCGAC GAACTGGTGT TGGGTAAGCG TATGGAAGAG CACTTGCGTT TTGCCGCCTG CTACTGGCAC ACCTTCTGCT GGAACGGGGC GGACATGTTT GGTGTGGGGG CGTTTAATCG TCCGTGGCAG CAGCCTGGTG AGGCACTGGC GTTGGCGAAG CGTAAAGCAG ATGTCGCATT TGAGTTTTTC CACAAGTTAC ATGTGCCATT TTATTGCTTC CACGATGTGG ATGTTTCCCC TGAGGGCGCG TCGTTAAAAG AGTACATCAA TAATTTTGCG CAAATGGTTG ATGTCCTGGC AGCCAAGCAA GAAGAGAGCG GCGTGAAGCT GCTGTGGGGA ACCGCTAACT GCTTTACAAA CCCTCGCTAT GGCGCGGGTG CGGCGACGAA CCCAGATCCT GAAGTCTTCA GCTGGGCGGC AACGCAAGTT GTTACAGCGA TGGAAGCAAC CCATAAATTG GGCGGTGAAA ACTATGTCCT GTGGGGTGGT CGTGAAGGTT ACGAAACGCT GTTAAATACC GACTTGCGTC AGGAGCGTGA ACAACTGGGC CGCTTTATGC AGATGGTGGT TGAGCATAAA CATAAAATCG GCTTCCAGGG CACGTTGCTT ATCGAACCGA AACCGCAAGA ACCGACTAAA CATCAATATG ATTACGATGC CGCGACGGTC TATGGCTTCC TGAAACAGTT TGGTCTGGAA AAAGAGATTA AACTGAACAT TGAAGCTAAC CACGCGACGC TGGCAGGTCA CTCTTTCCAT CATGAAATAG CCACCGCCAT TGCGCTTGGC CTGTTCGGTT CTGTCGACGC CAACCGTGGC GATGCGCAAC TGGGCTGGGA CACCGACCAG TTCCCGAACA GTGTGGAAGA GAATGCGCTG GTGATGTATG AAATTCTCAA AGCAGGCGGT TTCACCACCG GTGGTCTGAA CTTCGATGCC AAAGTACGTC GTCAAAGTAC TGATAAATAT GATCTGTTTT ACGGTCATAT CGGCGCGATG GATACGATGG CACTGGCGCT GAAAATTGCA GCGCGCATGA TTGAAGATGG CGAGCTGGAT AAACGCATCG CGCAGCGTTA TTCCGGCTGG AATAGCGAAT TGGGCCAGCA AATCCTGAAA GGCCAAATGT CACTGGCAGA TTTAGCCAAA TATGCTCAGG AACATAATTT GTCTCCGGTG CATCAGAGTG GTCGCCAGGA GCAACTGGAA AATCTGGTAA ATCATTATCT GTTCGACAAA TAA
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Protein sequence | MQAYFDQLDR VRYEGSKSSN PLAFRHYNPD ELVLGKRMEE HLRFAACYWH TFCWNGADMF GVGAFNRPWQ QPGEALALAK RKADVAFEFF HKLHVPFYCF HDVDVSPEGA SLKEYINNFA QMVDVLAAKQ EESGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV VTAMEATHKL GGENYVLWGG REGYETLLNT DLRQEREQLG RFMQMVVEHK HKIGFQGTLL IEPKPQEPTK HQYDYDAATV YGFLKQFGLE KEIKLNIEAN HATLAGHSFH HEIATAIALG LFGSVDANRG DAQLGWDTDQ FPNSVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM DTMALALKIA ARMIEDGELD KRIAQRYSGW NSELGQQILK GQMSLADLAK YAQEHNLSPV HQSGRQEQLE NLVNHYLFDK
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