| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3937 |
|---|
| Symbol | livK |
|---|
| ID | 5590272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3913504 |
|---|
| End bp | 3914613 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640927559 |
|---|
| Product | high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK |
|---|
| Protein accession | YP_001464920 |
|---|
| Protein GI | 157159223 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA ATGCGAAAAC TATCATCGCA GGGATGATTG CACTGGCAAT TTCACACACC
GCTATGGCTG ACGATATTAA AGTCGCCGTT GTCGGCGCGA TGTCCGGCCC GATTGCCCAG
TGGGGCGATA TGGAATTTAA CGGCGCGCGT CAGGCGATTA AAGACATTAA TGCCAAAGGG
GGAATTAAAG GCGATAAGCT GGTGGGCGTG GAATATGACG ACGCCTGCGA CCCGAAACAA
GCCGTTGCGG TCGCCAACAA AATCGTTAAC GACGGCATTA AATACGTTAT TGGTCATCTG
TGTTCTTCTT CTACCCAACC TGCATCAGAT ATCTACGAAG ACGAAGGTAT TCTGATGATC
TCGCCGGGAG CGACCAACCC GGAGCTGACC CAACGCGGTT ATCAACACAT TATGCGTACT
GCCGGGCTGG ACTCTTCCCA GGGGCCAACG GCGGCAAAAT ACATTCTTGA GACGGTGAAG
CCCCAGCGCA TCGCCATCAT TCACGACAAA CAACAGTATG GCGAAGGGCT GGCGCGTTCG
GTGCAGGACG GGCTGAAAGC GGCTAACGCC AACGTCGTCT TCTTCGACGG TATTACCGCC
GGGGAGAAAG ATTTCTCCGC GCTGATCGCC CGCCTGAAAA AAGAAAACAT CGACTTCGTT
TACTACGGCG GTTACTACCC GGAAATGGGG CAGATGCTGC GCCAGGCCCG TTCCGTTGGC
CTGAAAACTC AGTTTATGGG GCCGGAAGGT GTGGGTAACG CATCATTGTC GAATATTGCC
GGTGATGCTG CCGAAGGCAT GTTGGTCACT ATGCCAAAAC GCTATGACCA GGATCCGGCA
AACCAGGGCA TCGTTGATGC GCTGAAAGCA GACAAGAAAG ATCCGTCCGG GCCTTATGTC
TGGATCACCT ACGCGGCGGT GCAATCTCTG GCGACTGCCC TTGAGCGTAC TGGCAGCGAT
GAGCCGCTGG CGCTGGTGAA AGATTTAAAA GCTAACGGTG CAAACACCGT GATTGGGCCG
CTGAACTGGG ATGAAAAAGG CGATCTTAAG GGATTTGATT TTGGTGTCTT CCAGTGGCAC
GCCGACGGTT CATCCACGGC AGCCAAGTGA
|
|---|
| Protein sequence | MKRNAKTIIA GMIALAISHT AMADDIKVAV VGAMSGPIAQ WGDMEFNGAR QAIKDINAKG
GIKGDKLVGV EYDDACDPKQ AVAVANKIVN DGIKYVIGHL CSSSTQPASD IYEDEGILMI
SPGATNPELT QRGYQHIMRT AGLDSSQGPT AAKYILETVK PQRIAIIHDK QQYGEGLARS
VQDGLKAANA NVVFFDGITA GEKDFSALIA RLKKENIDFV YYGGYYPEMG QMLRQARSVG
LKTQFMGPEG VGNASLSNIA GDAAEGMLVT MPKRYDQDPA NQGIVDALKA DKKDPSGPYV
WITYAAVQSL ATALERTGSD EPLALVKDLK ANGANTVIGP LNWDEKGDLK GFDFGVFQWH
ADGSSTAAK
|
|---|
| |