| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3764 |
|---|
| Symbol | aroE |
|---|
| ID | 5588912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3759833 |
|---|
| End bp | 3760651 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640927388 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_001464749 |
|---|
| Protein GI | 157157510 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000795686 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCT ATGCTGTTTT TGGTAATCCG ATAGCCCACA GCAAATCGCC ATTCATTCAT
CAGCAATTTG CTCAGCAACT GAATATTGAA CATCCCTATG GGCGCGTGTT GGCACCCATC
AATGATTTCA TCAACACACT GAACGCTTTC TTTCGTGCTG GTGGTAAAGG TGCGAATGTG
ACGGTGCCTT TTAAAGAAGA GGCTTTTGCC AGAGCGGATG AGCTTACTGA ACGGGCAGCG
TTGGCTGGTG CTGTTAATAC CCTCAAGCGG TTAGAAGATG GACGCCTGCT GGGTGACAAT
ACCGATGGTA TAGGTTTGTT AAGCGATCTG GAACGTCTGT CTTTTATCCG TCCTGGTTTA
CGTATTCTGC TCATCGGCGC TGGTGGAGCA TCTCGCGGCG TACTACTGCC ACTTCTTTCC
CTGGACTGTG CGGTGACAAT CACTAATCGG ACGGTATCCC GCGCGGAAGA GTTGGCTAAA
TTGTTTGCGC ACACTGGCAG TATTCAGGCG TTGGGTATGG ACGAACTGGA AGGTCATGAG
TTTGATCTCA TTATTAATGC AACATCCAGT GGCATCAGTG GTGATATTCC GGCGATCCCG
TCATCGCTCA TTCATCCAGG CATTTATTGC TATGACATGT TCTATCAGAA AGGAAAAACT
CCTTTTCTGG CATGGTGTGA GCAGCGAGGC TCAAAGCGTA ATGCTGATGG TTTAGGAATG
CTGGTGGCAC AGGCGGCTCA TGCCTTTCTT CTCTGGCACG GTGTTCTGCC TGACGTAGAA
CCAGTTATAA AGCAATTGCA GGAGGAATTG TCCGCGTGA
|
|---|
| Protein sequence | METYAVFGNP IAHSKSPFIH QQFAQQLNIE HPYGRVLAPI NDFINTLNAF FRAGGKGANV
TVPFKEEAFA RADELTERAA LAGAVNTLKR LEDGRLLGDN TDGIGLLSDL ERLSFIRPGL
RILLIGAGGA SRGVLLPLLS LDCAVTITNR TVSRAEELAK LFAHTGSIQA LGMDELEGHE
FDLIINATSS GISGDIPAIP SSLIHPGIYC YDMFYQKGKT PFLAWCEQRG SKRNADGLGM
LVAQAAHAFL LWHGVLPDVE PVIKQLQEEL SA
|
|---|
| |