Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3751 |
Symbol | acrF |
ID | 5588989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3744837 |
End bp | 3747941 |
Gene Length | 3105 bp |
Protein Length | 1034 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640927373 |
Product | acriflavine resistance protein F |
Protein accession | YP_001464740 |
Protein GI | 157155020 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0990355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACT TTTTTATTCG ACGACCGATA TTTGCATGGG TGCTGGCCAT TATTCTGATG ATGGCGGGCG CACTGGCGAT CCTACAATTG CCCGTCGCTC AGTATCCAAC CATTGCACCG CCTGCGGTTT CTGTTTCGGC AAACTATCCA GGTGCTGATG CGCAGACCGT GCAGGATACG GTGACGCAGG TTATCGAACA GAATATGAAT GGTATCGATA ACCTGATGTA TATGTCCTCC ACCAGCGATT CCGCCGGTAG CGTGACAATT ACCCTTACCT TCCAGTCCGG GACCGATCCT GATATCGCGC AAGTGCAGGT ACAGAACAAA CTCCAGCTCG CCACGCCGTT GCTGCCGCAG GAGGTTCAGC AGCAGGGGAT CAGTGTTGAA AAGTCCAGTA GCAGCTATTT GATGGTGGCG GGCTTTGTCT CTGATAACCC AGACACCACA CAGGACGATA TCTCGGACTA TGTGGCCTCT AACGTTAAAG ATACGCTTAG CCGTCTGAAT GGCGTCGGTG ACGTACAGCT TTTCGGCGCA CAGTATGCGA TGCGTATCTG GCTGGACGCC GATCTGCTAA ACAAATATAA ACTGACACCG GTTGATGTGA TTAACCAGTT GAAGGTACAG AACGATCAGA TCGCTGCCGG ACAGTTGGGC GGAACGCCAG CGTTACCAGG GCAACAGTTG AATGCCTCGA TTATTGCTCA AACGCGGTTA AAAAATCCGG AAGAATTCGG CAAAGTGACC CTGCGCGTAA ACAGTGACGG CTCGGTGGTA CGCCTGAAAG ATGTCGCACG GGTTGAACTT GGCGGTGAAA ACTATAACGT TATCGCTCGT ATCAACGGAA AACCGGCGGC GGGCCTGGGG ATTAAGCTGG CAACCGGCGC GAATGCTCTC GATACCGCGA AAGCCATTAA GGCAAAACTG GCGGAATTAC AGCCATTCTT CCCGCAGGGA ATGAAGGTTC TCTACCCTTA TGACACCACG CCATTCGTCC AGCTTTCTAT TCACGAAGTG GTAAAAACGC TGTTCGAAGC CATTATGCTG GTGTTCCTGG TGATGTATCT GTTCTTGCAG AATATGCGAG CAACGCTGAT CCCCACCATT GCGGTACCCG TGGTGTTATT AGGGACGTTT GCCATCCTCG CCGCTTTTGG TTACTCCATC AACACACTAA CGATGTTCGG GATGGTGCTT GCCATCGGGC TGCTCGTCGA TGATGCGATA GTGGTGGTGG AGAACGTCGA GCGCGTGATG ATGGAGGATA AGCTCCCGCC AAAAGAAGCG ACGGAAAAAT CGATGTCGCA AATTCAGGGC GCACTGGTGG GTATCGCGAT GGTGCTGTCA GCGGTATTTA TTCCGATGGC ATTCTTCGGC GGTTCTACTG GGGCAATTTA TCGCCAGTTC TCTATCACCA TCGTTTCGGC AATGGCGCTT TCTGTTCTGG TGGCATTGAT TCTTACCCCT GCGTTATGTG CAACACTGCT CAAACCCACC TCAGCTGAGC ATCACGAAAA TAAGGGTGGT TTCTTCGGCT GGTTTAATAC CACCTTCGAT CATAGCGTTA ACCACTACAC CAACAGCGTC GGCAAAATCC TCGGTTCCAC AGGACGATAT TTACTGATCT ATGCGCTGAT TGTTGCAGGA ATGGTGGTGT TGTTTTTACG TCTTCCGTCT TCCTTCTTAC CTGAAGAGGA TCAGGGTGTC TTTCTGACCA TGATTCAGTT ACCCGCTGGC GCGACGCAAG AGCGGACGCA AAAAGTGTTG GATCAAGTGA CGGATTACTA TCTGAAGAAC GAGAAAGCGA ACGTTGAAAG TGTCTTTACG GTTAACAGCT TTAGCTTCAG CGGCCAGGCA CAAAACGCCG GTATGGCCTT CGTCAGTCTG AAACCGTGGG AAGAGCGTAA TGGTGATGAA AACAGTGCGG AAGCGGTAAT CCATCGTGCC AAAATGGAAT TGGGCAAGAT CCGCGACGGT TTTGTCATTC CATTCAATAT GCCAGCCATT GTTGAACTGG GCACGGCAAC GGGTTTCGAC TTTGAGTTAA TTGATCAGGC TGGGCTAGGT CACGATGCCC TGACCCAGGC CCGTAACCAG TTGCTTGGCA TGGCGGCGCA ACATCCTGCC AGCTTAGTCA GCGTGCGTCC TAATGGCCTG GAAGACACCG CGCAGTTTAA ACTGGAAGTT GACCAGGAAA AGGCGCAGGC ATTAGGTGTT TCACTTTCTG ACATCAATCA GACCATTTCA ACGGCGTTGG GTGGGACTTA CGTTAACGAC TTCATCGACC GTGGTCGCGT GAAAAAGGTG TATGTTCAGG CGGATGCCAA ATTCCGTATG CTGCCAGAAG ATGTCGATAA ACTTTATGTC CGCAGCGCCA ACGGCGAAAT GGTGCCATTC TCGGCCTTTA CCACTTCACA TTGGGTGTAT GGCTCTCCGC GACTGGAACG CTACAACGGT CTGCCGTCAA TGGAGATTCA GGGGGAAGCC GCGCCAGGAA CCAGTTCCGG CGATGCCATG GCGTTGATGG AAAACCTTGC GTCAAAATTA CCTGCTGGCA TTGGTTATGA CTGGACGGGT ATGTCGTATC AGGAACGCTT ATCGGGAAAC CAGGCTCCCG CTCTGGTAGC AATTTCCTTT GTGGTTGTTT TCCTGTGCCT TGCTGCACTC TATGAAAGCT GGTCAATTCC TGTCTCGGTT ATGTTGGTCG TGCCGTTAGG GATTGTCGGC GTGCTGCTGG CGGCGACACT CTTTAATCAA AAAAATGACG TCTACTTTAT GGTGGGCTTG CTAACGACAA TTGGCTTGTC GGCCAAAAAC GCTATTTTGA TTGTTGAGTT CGCTAAAGAT CTCATGGAGA AAGAGGGTAA AGGTGTTGTT GAAGCGACAC TAATGGCAGT ACGTATGCGT CTGCGTCCTA TCCTGATGAC CTCTCTCGCC TTTATTCTCG GCGTATTACC GCTAGCTATC AGTAACGGTG CCGGCAGTGG CGCGCAGAAC GCAGTGGGTA TCGGGGTAAT GGGCGGAATG GTCTCTGCAA CGTTGCTGGC AATCTTCTTC GTACCGGTGT TCTTTGTGGT GATCCGCCGT TGCTTTAAAG GATAA
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Protein sequence | MANFFIRRPI FAWVLAIILM MAGALAILQL PVAQYPTIAP PAVSVSANYP GADAQTVQDT VTQVIEQNMN GIDNLMYMSS TSDSAGSVTI TLTFQSGTDP DIAQVQVQNK LQLATPLLPQ EVQQQGISVE KSSSSYLMVA GFVSDNPDTT QDDISDYVAS NVKDTLSRLN GVGDVQLFGA QYAMRIWLDA DLLNKYKLTP VDVINQLKVQ NDQIAAGQLG GTPALPGQQL NASIIAQTRL KNPEEFGKVT LRVNSDGSVV RLKDVARVEL GGENYNVIAR INGKPAAGLG IKLATGANAL DTAKAIKAKL AELQPFFPQG MKVLYPYDTT PFVQLSIHEV VKTLFEAIML VFLVMYLFLQ NMRATLIPTI AVPVVLLGTF AILAAFGYSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM MEDKLPPKEA TEKSMSQIQG ALVGIAMVLS AVFIPMAFFG GSTGAIYRQF SITIVSAMAL SVLVALILTP ALCATLLKPT SAEHHENKGG FFGWFNTTFD HSVNHYTNSV GKILGSTGRY LLIYALIVAG MVVLFLRLPS SFLPEEDQGV FLTMIQLPAG ATQERTQKVL DQVTDYYLKN EKANVESVFT VNSFSFSGQA QNAGMAFVSL KPWEERNGDE NSAEAVIHRA KMELGKIRDG FVIPFNMPAI VELGTATGFD FELIDQAGLG HDALTQARNQ LLGMAAQHPA SLVSVRPNGL EDTAQFKLEV DQEKAQALGV SLSDINQTIS TALGGTYVND FIDRGRVKKV YVQADAKFRM LPEDVDKLYV RSANGEMVPF SAFTTSHWVY GSPRLERYNG LPSMEIQGEA APGTSSGDAM ALMENLASKL PAGIGYDWTG MSYQERLSGN QAPALVAISF VVVFLCLAAL YESWSIPVSV MLVVPLGIVG VLLAATLFNQ KNDVYFMVGL LTTIGLSAKN AILIVEFAKD LMEKEGKGVV EATLMAVRMR LRPILMTSLA FILGVLPLAI SNGAGSGAQN AVGIGVMGGM VSATLLAIFF VPVFFVVIRR CFKG
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