| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3742 |
|---|
| Symbol | panF |
|---|
| ID | 5588422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 3737411 |
|---|
| End bp | 3738862 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640927364 |
|---|
| Product | sodium/panthothenate symporter |
|---|
| Protein accession | YP_001464731 |
|---|
| Protein GI | 157155341 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4145] Na+/panthothenate symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000150129 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTG AAGTAATTCT ACCGCTGGTC GCCTATCTGG TGGTGGTGTT CGGTATCTCG
GTTTATGCGA TGCGTAAACG GAGCACCGGC ACCTTCCTTA ATGAGTATTT CCTCGGCAGC
CGCTCTATGG GCGGTATTGT GCTGGCGATG ACGCTCACCG CGACCTATAT CAGTGCCAGT
TCGTTTATCG GCGGGCCAGG AGCTGCTTAT AAATACGGGC TGGGCTGGGT ATTGCTGGCG
ATGATTCAGC TTCCTGCAGT CTGGCTTTCA CTCGGTATTC TCGGCAAGAA GTTTGCGATT
CTTGCGCGCC GCTACAATGC AGTGACGCTG AACGATATGC TGTTTGCCCG CTACCAGAGT
CGTCTTCTGG TGTGGCTGGC GAGTTTGAGT TTGCTGGTTG CGTTCGTTGG TGCGATGACC
GTGCAGTTTA TCGGCGGTGC GCGCCTGCTG GAAACCGCGG CGGGTATTCC TTATGAAACC
GGGCTGCTGA TTTTTGGTAT CAGCATTGCG TTATATACCG CCTTTGGTGG CTTTCGCGCC
AGCGTGCTGA ACGACACCAT GCAAGGGCTT GTGATGCTGA TTGGCACCGT TGTGCTGCTT
ATTGGCGTGG TACATGCCGC TGGCGGCTTA AGCAACGCAG TACAGACCTT GCAAACCATC
GATCCGCAAC TGGTTACGCC ACAAGGCGCT GACGATATTC TGTCGCCTGC CTTTATGACG
TCGTTCTGGG TACTGGTGTG CTTTGGCGTG ATTGGCCTGC CGCATACTGC GGTGCGCTGT
ATCTCTTATA AAGACAGCAA AGCAGTACAC CGGGGGATCA TCATCGGTAC GATTGTAGTC
GCAATCCTGA TGTTCGGTAT GCACCTGGCC GGAGCGTTAG GTCGTGCAGT GATCCCCGAT
CTCACCGTAC CGGATCTGGT GATCCCGACG TTAATGGTAA AAGTGCTGCC ACCGTTTGCT
GCCGGAATCT TCCTGGCTGC ACCTATGGCT GCGATCATGT CGACGATCAA TGCCCAGTTG
CTGCAAAGTT CCGCTACGAT CATTAAAGAT CTCTATCTGA ATATCCGTCC GGATCAAATG
CAAAACGAGA CGCGTCTGAA GCGGATGTCG GCGGTAATTA CGTTAGTTCT CGGCGCGTTG
CTGCTGCTTG CCGCCTGGAA GCCGCCAGAA ATGATCATCT GGCTGAATTT GCTGGCCTTC
GGTGGGCTGG AAGCCGTTTT CCTGTGGCCG CTGGTGCTGG GTCTTTACTG GGAACGCGCC
AACGCCAAAG GCGCGCTAAG TGCGATGATC GTTGGCGGCG TGCTGTATGC CGTACTCGCG
ACGCTGAATA TTCAGTACCT GGGCTTCCAC CCTATCGTGC CCTCGTTACT ACTAAGTTTG
CTGGCTTTCC TGGTCGGAAA CCGTTTCGGT ACATCCGTCC CGCAAGCTAC CGTTTTGACT
ACTGATAAAT AA
|
|---|
| Protein sequence | MQLEVILPLV AYLVVVFGIS VYAMRKRSTG TFLNEYFLGS RSMGGIVLAM TLTATYISAS
SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGILGKKFAI LARRYNAVTL NDMLFARYQS
RLLVWLASLS LLVAFVGAMT VQFIGGARLL ETAAGIPYET GLLIFGISIA LYTAFGGFRA
SVLNDTMQGL VMLIGTVVLL IGVVHAAGGL SNAVQTLQTI DPQLVTPQGA DDILSPAFMT
SFWVLVCFGV IGLPHTAVRC ISYKDSKAVH RGIIIGTIVV AILMFGMHLA GALGRAVIPD
LTVPDLVIPT LMVKVLPPFA AGIFLAAPMA AIMSTINAQL LQSSATIIKD LYLNIRPDQM
QNETRLKRMS AVITLVLGAL LLLAAWKPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA
NAKGALSAMI VGGVLYAVLA TLNIQYLGFH PIVPSLLLSL LAFLVGNRFG TSVPQATVLT
TDK
|
|---|
| |