| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3727 |
|---|
| Symbol | tldD |
|---|
| ID | 5590416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3720661 |
|---|
| End bp | 3722106 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640927350 |
|---|
| Product | protease TldD |
|---|
| Protein accession | YP_001464717 |
|---|
| Protein GI | 157159207 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTGA ACCTGGTAAG TGAACAATTG CTAGCGGCGA ACGGCCTGAA ACATCAGGAC
TTGTTCGCGA TCCTCGGTCA ACTGGCCGAA CGTCGCCTTG ATTATGGCGA TCTCTATTTT
CAGTCGAGCT ATCACGAATC CTGGGTTTTA GAAGACCGCA TTATTAAAGA TGGTTCTTAC
AACATCGATC AGGGCGTTGG TGTGCGTGCA ATCAGTGGTG AAAAAACCGG ATTTGCTTAC
GCAGACCAAA TCAGCCTGCT GGCGCTGGAA CAGAGTGCGC AAGCGGCGCG CACCATCGTC
CGTGATAGTG GTGATGGCAA AGTACAGACG CTGGGCGCGG TAGAGCATAG CCCGTTGTAT
ACCTCGGTAG ATCCGCTGCA AAGCATGAGC CGTGAAGAGA AGCTGGATAT CCTGCGTCGC
GTCGATAAGG TTGCCCGCGA AGCGGACAAG CGCGTACAAG AAGTGACTGC CAGCCTCAGC
GGCGTTTATG AATTAATTCT GGTTGCGGCC ACCGACGGCA CGCTGGCGGC GGATGTTCGT
CCGCTGGTGC GTCTTTCCGT GAGCGTTCTG GTCGAAGAAG ATGGCAAACG CGAACGCGGT
GCCAGTGGCG GCGGCGGTCG TTTTGGTTAT GAGTTCTTCC TTGCCGATCT TGACGGTGAA
GTCCGTGCGG ATGCATGGGC AAAAGAAGCA GTGCGTATGG CGCTGGTCAA TCTTTCTGCC
GTCGCCGCAC CAGCGGGCAC CATGCCGGTA GTACTTGGCG CAGGTTGGCC GGGCGTGCTG
TTGCATGAAG CGGTGGGGCA CGGTCTGGAA GGCGACTTCA ACCGCCGTGG CACTTCAGTA
TTTAGTGGAC AGGTCGGGGA GCTGGTGGCT TCAGAACTGT GTACCGTGGT TGATGACGGT
ACGATGGTCG ATCGCCGTGG TTCGGTGGCG ATTGATGATG AAGGTACGCC AGGTCAGTAC
AACGTGCTGA TTGAGAATGG CATCCTGAAA GGCTACATGC AGGATAAACT CAACGCGCGT
TTGATGGGGA TGACACCGAC TGGCAACGGT CGCCGTGAAT CCTACGCTCA TCTGCCGATG
CCGCGTATGA CCAACACCTA TATGCTGCCG GGTAAATCGA CCCCGCAAGA AATTATTGAA
TCTGTTGAGT ACGGTATCTA TGCACCGAAC TTTGGTGGCG GTCAGGTGGA TATTACATCC
GGCAAATTCG TTTTCTCCAC TTCAGAAGCG TATCTGATTG AAAACGGTAA AGTAACGAAG
CCGGTGAAAG GCGCGACGTT GATTGGTTCC GGTATCGAAA CCATGCAGCA GATTTCGATG
GTGGGCAACG ACCTGAAACT GGATAACGGC GTGGGTGTCT GCGGTAAAGA AGGGCAAAGT
TTGCCGGTTG GCGTGGGCCA GCCAACGCTG AAAGTTGATA ACCTGACTGT TGGCGGTACC
GCGTAA
|
|---|
| Protein sequence | MSLNLVSEQL LAANGLKHQD LFAILGQLAE RRLDYGDLYF QSSYHESWVL EDRIIKDGSY
NIDQGVGVRA ISGEKTGFAY ADQISLLALE QSAQAARTIV RDSGDGKVQT LGAVEHSPLY
TSVDPLQSMS REEKLDILRR VDKVAREADK RVQEVTASLS GVYELILVAA TDGTLAADVR
PLVRLSVSVL VEEDGKRERG ASGGGGRFGY EFFLADLDGE VRADAWAKEA VRMALVNLSA
VAAPAGTMPV VLGAGWPGVL LHEAVGHGLE GDFNRRGTSV FSGQVGELVA SELCTVVDDG
TMVDRRGSVA IDDEGTPGQY NVLIENGILK GYMQDKLNAR LMGMTPTGNG RRESYAHLPM
PRMTNTYMLP GKSTPQEIIE SVEYGIYAPN FGGGQVDITS GKFVFSTSEA YLIENGKVTK
PVKGATLIGS GIETMQQISM VGNDLKLDNG VGVCGKEGQS LPVGVGQPTL KVDNLTVGGT
A
|
|---|
| |