Gene EcE24377A_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3650 
SymboltruB 
ID5589836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3649137 
End bp3650081 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content52% 
IMG OID640927273 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_001464642 
Protein GI157155475 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTC CTCGTCGTCG CGGTCGCGAC ATTAACGGCG TTTTGTTGCT GGATAAATCG 
CAGGGTATGT CCAGCAATGA TGCGCTGCAA AAAGTGAAAC GGATTTATAA CGCCAACCGT
GCCGGGCATA CCGGTGCGCT GGACCCGCTG GCAACTGGCA TGTTGCCAAT TTGCCTCGGG
GAAGCGACGA AGTTTTCCCA GTATCTGCTG GACTCCGACA AACGCTATCG GGTCATTGCG
CGTCTTGGAC AGCGTACCGA TACTTCTGAT GCCGACGGAC AAATCGTTGA AGAACGTCCG
GTAACCTTTA GCGCAGAGCA ACTGGCGGCG GCGCTGGATA CTTTCCGTGG CGATATCGAA
CAGATCCCTT CGATGTATTC AGCACTGAAA TATCAGGGTA AAAAACTGTA CGAATATGCG
CGTCAGGGCA TTGAAGTACC GCGTGAAGCG CGCCCGATTA CCGTTTATGA ATTGCTGTTT
ATTCGCCACG AAGGCAATGA GCTGGAGCTG GAAATTCACT GCTCAAAAGG CACTTATATC
CGCACCATCA TTGATGACCT GGGTGAAAAA CTCGGTTGTG GCGCGCATGT TATTTACCTG
CGTCGTCTGG CGGTAAGTAA ATATCCGGTT GAACGGATGG TGACCCTGGA ACATCTGCGT
GAACTGGTCG AACAAGCCGA ACAGCAGGAT ATTCCGGCTG CGGAGTTACT TGATCCATTA
CTGATGCCAA TGGACAGTCC AGCTTCGGAC TACCCGGTGG TGAATCTTCC GTTAACGTCT
TCTGTTTACT TCAAAAATGG TAACCCAGTT CGTACATCCG GTGCGCCGCT GGAAGGACTG
GTTCGCGTTA CAGAAGGTGA GAACGGCAAA TTTATCGGTA TGGGCGAAAT TGACGATGAA
GGCCGCGTTG CGCCTCGTCG CCTGGTGGTT GAATACCCGG CGTAA
 
Protein sequence
MSRPRRRGRD INGVLLLDKS QGMSSNDALQ KVKRIYNANR AGHTGALDPL ATGMLPICLG 
EATKFSQYLL DSDKRYRVIA RLGQRTDTSD ADGQIVEERP VTFSAEQLAA ALDTFRGDIE
QIPSMYSALK YQGKKLYEYA RQGIEVPREA RPITVYELLF IRHEGNELEL EIHCSKGTYI
RTIIDDLGEK LGCGAHVIYL RRLAVSKYPV ERMVTLEHLR ELVEQAEQQD IPAAELLDPL
LMPMDSPASD YPVVNLPLTS SVYFKNGNPV RTSGAPLEGL VRVTEGENGK FIGMGEIDDE
GRVAPRRLVV EYPA