| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3420 |
|---|
| Symbol | gspK |
|---|
| ID | 5589996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 3429138 |
|---|
| End bp | 3430115 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640927047 |
|---|
| Product | general secretion pathway protein K |
|---|
| Protein accession | YP_001464417 |
|---|
| Protein GI | 157155920 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCT CACCACCAAA ACGCGGAATG GCACTGGTCG TGGTGCTGGT ATTGCTGGCA
GTTATGATGC TGGTAATCAT CACGCTTTCC GGGCGGATGC AGCAGCAACT GGGAAGAACG
CGCAGCCAGC AGGAGTACCA GCAGGCGCTG TGGTACAGCG CCAGTGCAGA AAGCCTGGCG
CTGAGCGCGC TCAGTCTGAG CCTGAAAAAT GAAAAGCGCG TGCATCTGGA ACAGCCGTGG
GCATCCGGCC CTCGTTTCTT CCCTCTGCCG CAGGGGCAAA TTGCGGTCAC CCTGCGTGAC
GCACAGGCTT GCTTTAACCT GAATGCCCTT GCTCAGCCGA CAACGGCGTC GCGTCCGCTT
GCGGTACAAC AGTTGATTGC CCTGATCTCG CGCCTGGATG TGCCTGCTTA TCGGGCCGAA
CTGATAGCCG AAAGCCTGTG GGAGTTTATT GACGAGGACC GCAGCGTGCA GACACGTCTG
GGCCGTGAAG ACAGCGAGTA TCTCGCCCGT TCGGTGCCTT TCTACGCCGC GAATCAACCG
CTGGCTGATA TCAGTGAGAT GCGCGTGGTG CAGGGAATGG ACGCCGGGCT TTATCAAAAA
CTGAAACCGC TGGTCTGTGC GCTGCCGATG ACCCGCCAGC AAATCAACAT CAATACTTTA
GACGTCACGC AAAGTGTGAT TCTTGAGGCG CTGTTTGACC CGTGGTTAAG CCCTGTTCAG
GCGCGGGCGT TATTACAACA ACGTCCGGCG AAGGGCTGGG AAGATGTCGA TCAGTTTCTT
GCACAGCCGC TACTTGCTGA CGTCGATGAG CGTACTAAAA AACAGCTAAA AACCGTCCTG
AGCGTGGACA GCAATTACTT CTGGCTGCGT TCAGATATCA CCGTGAATGA GATTGAACTG
ACGATGAACT CGTTAATTGT CCGCATGGGC CCACAACACT TTTCGGTTCT CTGGCATCAG
ACAGGAGAAA GTGAGTGA
|
|---|
| Protein sequence | MITSPPKRGM ALVVVLVLLA VMMLVIITLS GRMQQQLGRT RSQQEYQQAL WYSASAESLA
LSALSLSLKN EKRVHLEQPW ASGPRFFPLP QGQIAVTLRD AQACFNLNAL AQPTTASRPL
AVQQLIALIS RLDVPAYRAE LIAESLWEFI DEDRSVQTRL GREDSEYLAR SVPFYAANQP
LADISEMRVV QGMDAGLYQK LKPLVCALPM TRQQININTL DVTQSVILEA LFDPWLSPVQ
ARALLQQRPA KGWEDVDQFL AQPLLADVDE RTKKQLKTVL SVDSNYFWLR SDITVNEIEL
TMNSLIVRMG PQHFSVLWHQ TGESE
|
|---|
| |