Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3419 |
Symbol | gspL |
ID | 5587276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 3427963 |
End bp | 3429141 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640927046 |
Product | GspL-like protein |
Protein accession | YP_001464416 |
Protein GI | 157156601 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTTCCA TCCTTGAGAT TTTTTTCCCG CTTTGCGCCG CTGATCCCAT CCATTGGCAG CGCCGTACAC CCGATGTGGA GCACGGTATC TGGTCTGACG TTGCTAACGA ACAGCTCCAG CAATGGCTGC AAACTGATGC GATTCGACTC TACATTCCCG GCGAATGGAT CAGCGTCTGG CAGGTTGAAC TGCCTGTTGT CGCCCGCAAG CAGATACCGA CTATTCTGCC CGCCTTACTG GAAGAAGAAC TGAACCAGGA TATCGATGAA CTGCATTTCG CCCCGTTGAA AATCAATCAG CAACTGGCAA CCGTAGCCGT GATTCACCAA CAGCATATGC GCAACATTGC GCAGTGGTTG CAGGAAAACG GCATCACCCG CGCTACCGTC GCGCCGGACT GGATGTCCAT TCCTTGTGGG TTTATGGCTG GCGATGCACA ACGGGTTATC TGCCGCATCG ATGAATGCCG GGGATGGAGC GCCGGGCGGG CGCTGGCTCC GGTCATGTTC CGCGCCCAGC TCAATGAGCA GAATTTACCG CTTTCGCTAA CCGTAGTCGG CATTGCACCG GAAAAGCTAT CAGCATGGGC TGGCGCAGAC GCTGAACGCC TGACCGTTAC AGCTCTGCCC GCCATTACCA CTTATGGCGA ACCGGAAGGG AACCTGCTGA CAGGGCCGTG GCAGCCTCGC GTCAGCTACC GAAAACAGTG GGCGCGCTGG CGGGTGATGA TTCTGCCGAT ATTGCTGATT CTGGTTGCGC TGGCAGTGGA GCGGGGCGTG ACGTTATGGA GCGTCAGCGA ACAGGTGGCG CAAAGCCGCA CCCAGGCGGA GGAACAGTTC TTAACGTTGT TCCCGGAGCA GAAGCGGATT GTGAATTTAC GCTCTCAGGT GACGATGGCG CTGAAAAAAT ATCGCCCACA GGCCGACGAT ACCCGGCTGC TCGCCGAGTT GTCAGCGATA GCCAGCACCC TGAAATCAGC GTCACTTTCC GACATCGAAA TGCGTGGTTT CACCTTTGAT CAAAAACGCC AGACGCTTCA CCTCCAGTTG CGGGCTGCTA ACTTTGCCAG TTTCGACAAA CTGCGTAGTG CACTGGCAAC CGATTATGTT GTGCAACAGG ACGCATTACA GAAAGAGGGT GATGCGGTTT CCGGCGGCGT AACGTTGCGG AGGAAATAA
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Protein sequence | MSSILEIFFP LCAADPIHWQ RRTPDVEHGI WSDVANEQLQ QWLQTDAIRL YIPGEWISVW QVELPVVARK QIPTILPALL EEELNQDIDE LHFAPLKINQ QLATVAVIHQ QHMRNIAQWL QENGITRATV APDWMSIPCG FMAGDAQRVI CRIDECRGWS AGRALAPVMF RAQLNEQNLP LSLTVVGIAP EKLSAWAGAD AERLTVTALP AITTYGEPEG NLLTGPWQPR VSYRKQWARW RVMILPILLI LVALAVERGV TLWSVSEQVA QSRTQAEEQF LTLFPEQKRI VNLRSQVTMA LKKYRPQADD TRLLAELSAI ASTLKSASLS DIEMRGFTFD QKRQTLHLQL RAANFASFDK LRSALATDYV VQQDALQKEG DAVSGGVTLR RK
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