Gene EcE24377A_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3419 
SymbolgspL 
ID5587276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3427963 
End bp3429141 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content56% 
IMG OID640927046 
ProductGspL-like protein 
Protein accessionYP_001464416 
Protein GI157156601 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3297] Type II secretory pathway, component PulL 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTTCCA TCCTTGAGAT TTTTTTCCCG CTTTGCGCCG CTGATCCCAT CCATTGGCAG 
CGCCGTACAC CCGATGTGGA GCACGGTATC TGGTCTGACG TTGCTAACGA ACAGCTCCAG
CAATGGCTGC AAACTGATGC GATTCGACTC TACATTCCCG GCGAATGGAT CAGCGTCTGG
CAGGTTGAAC TGCCTGTTGT CGCCCGCAAG CAGATACCGA CTATTCTGCC CGCCTTACTG
GAAGAAGAAC TGAACCAGGA TATCGATGAA CTGCATTTCG CCCCGTTGAA AATCAATCAG
CAACTGGCAA CCGTAGCCGT GATTCACCAA CAGCATATGC GCAACATTGC GCAGTGGTTG
CAGGAAAACG GCATCACCCG CGCTACCGTC GCGCCGGACT GGATGTCCAT TCCTTGTGGG
TTTATGGCTG GCGATGCACA ACGGGTTATC TGCCGCATCG ATGAATGCCG GGGATGGAGC
GCCGGGCGGG CGCTGGCTCC GGTCATGTTC CGCGCCCAGC TCAATGAGCA GAATTTACCG
CTTTCGCTAA CCGTAGTCGG CATTGCACCG GAAAAGCTAT CAGCATGGGC TGGCGCAGAC
GCTGAACGCC TGACCGTTAC AGCTCTGCCC GCCATTACCA CTTATGGCGA ACCGGAAGGG
AACCTGCTGA CAGGGCCGTG GCAGCCTCGC GTCAGCTACC GAAAACAGTG GGCGCGCTGG
CGGGTGATGA TTCTGCCGAT ATTGCTGATT CTGGTTGCGC TGGCAGTGGA GCGGGGCGTG
ACGTTATGGA GCGTCAGCGA ACAGGTGGCG CAAAGCCGCA CCCAGGCGGA GGAACAGTTC
TTAACGTTGT TCCCGGAGCA GAAGCGGATT GTGAATTTAC GCTCTCAGGT GACGATGGCG
CTGAAAAAAT ATCGCCCACA GGCCGACGAT ACCCGGCTGC TCGCCGAGTT GTCAGCGATA
GCCAGCACCC TGAAATCAGC GTCACTTTCC GACATCGAAA TGCGTGGTTT CACCTTTGAT
CAAAAACGCC AGACGCTTCA CCTCCAGTTG CGGGCTGCTA ACTTTGCCAG TTTCGACAAA
CTGCGTAGTG CACTGGCAAC CGATTATGTT GTGCAACAGG ACGCATTACA GAAAGAGGGT
GATGCGGTTT CCGGCGGCGT AACGTTGCGG AGGAAATAA
 
Protein sequence
MSSILEIFFP LCAADPIHWQ RRTPDVEHGI WSDVANEQLQ QWLQTDAIRL YIPGEWISVW 
QVELPVVARK QIPTILPALL EEELNQDIDE LHFAPLKINQ QLATVAVIHQ QHMRNIAQWL
QENGITRATV APDWMSIPCG FMAGDAQRVI CRIDECRGWS AGRALAPVMF RAQLNEQNLP
LSLTVVGIAP EKLSAWAGAD AERLTVTALP AITTYGEPEG NLLTGPWQPR VSYRKQWARW
RVMILPILLI LVALAVERGV TLWSVSEQVA QSRTQAEEQF LTLFPEQKRI VNLRSQVTMA
LKKYRPQADD TRLLAELSAI ASTLKSASLS DIEMRGFTFD QKRQTLHLQL RAANFASFDK
LRSALATDYV VQQDALQKEG DAVSGGVTLR RK