Gene EcE24377A_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3314 
Symbol 
ID5586368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3325783 
End bp3327045 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content48% 
IMG OID640926951 
Productsite-specific recombinase, phage integrase family protein 
Protein accessionYP_001464322 
Protein GI157157483 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.426306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGA CTGACGCAAA AATCCGGGCA GCAAAGCCTA CTGACAAGGC TTATAAACTC 
ACTGACGGGG CTGGCATGTT CCTGCTGATA CATCCTAATG GTTCCCGTTA CTGGCGTCTC
CGTTATCGTA TTCTGGGTAA GGAGAAGACT CTGGCACTTG GTGTGTATCC AGAAGTTTCT
CTCTCCGAAG CTCGTACAAA ACGGGATGAG GCCCGAAAAC TGATTTCAGA GGGGATTGAC
CCTTGCGAAC AGAAAAGAGT TAAAAAAGTA GTCCCTGATT TACAGCTCTC TTTTGAACAT
ATTGCACGAC GCTGGCATGC CAGTAATAAA CAATGGGCAC AATCACACAG CGATAAAGTA
CTCAAAAGCC TCGAGACACA CGTTTTCCCC TTTATCGGCA ACCGGGATAT CACAACACTC
AATACCCCGG ACCTGCTTAT CCCTGTTCGT GCTGCAGAAG CAAAACAAAT TTATGAAATC
GCTAGTCGTC TGCAGCAAAG AATATCTGCT GTAATGCGTT ACGCCGTACA GTCTGGCATC
ATCAGATATA ACCCGGCTCT GGATATGGCT GGTGCATTGA CCACGGTAAA ACGCCAGCAT
CGCCCCGCTC TGAATCTTTC ACGCCTGCCT GAACTTCTGT CGCGTATTGA CGGTTATAAA
GGCCAGCCTG TCACCCGGCT TGCCGTTATG CTGAATTTAC TGGTTTTTAT TCGTTCCAGT
GAACTCAGAT ATGCCCGCTG GTCTGAAATT GATATTGACA ATGCCATGTG GACTATTCCA
GCCGAACGCG AACCTCTGCC TGGCGTAAAA TTCTCACACC GGGGCTCCAA GATGCGGACA
CCACATCTTG TGCCACTCAG TAAACAGGCT GTAGCCATAC TGACAGAACT TCAGACATGG
GCAGGTGAAA ATGGTCTGAT ATTTACGGGT GCACATGACC CGCGTAAACC AATCAGTGAA
AATACTGTAA ATAAAGCCCT GAGGGTGATG GGGTATGACA CAACCCAGGA AGTCTGTGGC
CATGGATTCC GGGCGATGGC GTGCAGTGCA TTGATTGAAT CAGGTTTGTG GTCCCGCGAT
GCTGTGGAAC GTCAGATGAG CCATCAGGAA CGTAACGGTG TACGTGCTGC TTACATTCAT
AAAGCAGAAC ATCTGGAAGA ACGGCGACTG ATGCTACAGT GGTGGGCCGA TTTTCTGGAT
GCAAACAGAG AAAAATTTAT CAGTCCATTT GAATATGCAA AGATTAATAA CCCATTAAAA
TAA
 
Protein sequence
MALTDAKIRA AKPTDKAYKL TDGAGMFLLI HPNGSRYWRL RYRILGKEKT LALGVYPEVS 
LSEARTKRDE ARKLISEGID PCEQKRVKKV VPDLQLSFEH IARRWHASNK QWAQSHSDKV
LKSLETHVFP FIGNRDITTL NTPDLLIPVR AAEAKQIYEI ASRLQQRISA VMRYAVQSGI
IRYNPALDMA GALTTVKRQH RPALNLSRLP ELLSRIDGYK GQPVTRLAVM LNLLVFIRSS
ELRYARWSEI DIDNAMWTIP AEREPLPGVK FSHRGSKMRT PHLVPLSKQA VAILTELQTW
AGENGLIFTG AHDPRKPISE NTVNKALRVM GYDTTQEVCG HGFRAMACSA LIESGLWSRD
AVERQMSHQE RNGVRAAYIH KAEHLEERRL MLQWWADFLD ANREKFISPF EYAKINNPLK