Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_3192 |
Symbol | xdhB |
ID | 5587358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | + |
Start bp | 3206256 |
End bp | 3207134 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640926832 |
Product | xanthine dehydrogenase subunit XdhB |
Protein accession | YP_001464204 |
Protein GI | 157156683 |
COG category | [C] Energy production and conversion |
COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGATT TTGCTTCTTA CCATCGCGCA GCAACCCTTG CCGATGCCAT CAACCTGCTG GCTGACAACC CGCAGGCCAA ACTGCTCGCC GGTGGCACTG ACGTACTGAT TCAGCTCCAC CATCACAATG ACCGTTATCG CCATATTGTT GATATTCATA ATCTGGCGGA GCTGCGGGGA ATTACGCTGG CGGAAGATGG CTCGCTACGT ATCGGCTCTG CAACGACATT TACCCAGCTA ATAGAAGATC CTATAACTCA ACGTCATCTC CCGGCGTTAT GTGCTGCGGC CACGTCCATT GCTGGACCGC AGATCCGTAA CGTCGCTACC TACGGTGGAA ATATTTGCAA CGGTGCCACC AGCGCAGATT CTGCCACGCC AACGCTAATT TATGACGCGA AACTGGAGAT CCACTCCCCG CACGGTGTTC GTTTCGTCCC GATTAATGGC TTTCACACCG GGCCGGGCAA AGTGTCTCTT GAGCATGACG AAATCCTCGT CGCCTTTCAT TTTCCGCCAC AGCCGAAAGA ACACGCGGGC AGCGCGCATT TTAAATATGC CATGCGCGAC GCAATGGATA TTTCAACGAT TGGCTGCGCC GCACATTGCC GACTGGATAA CGGCAATTTC AGCGAATTAC GCCTGGCATT TGGTGTTGCC GCGCCAACGC CGATTCGCTG CCAACATGCC GAACATACTG CACAAAATGC GCCATTAAAC CTGCAAACGC TGGAAGCTAT CAGCGAATCT GTCCTGCAAG ATGTCGCCCC GCGTTCTTCA TGGCGGGCCA GTAAAGAGTT TCGTCTGCAT CTCATCCAGA CGATGACCAA AAAAGTGATT AGCGAAGCCG TCGCCGCGGC GGGGGGAAAA TTGCAATGA
|
Protein sequence | MFDFASYHRA ATLADAINLL ADNPQAKLLA GGTDVLIQLH HHNDRYRHIV DIHNLAELRG ITLAEDGSLR IGSATTFTQL IEDPITQRHL PALCAAATSI AGPQIRNVAT YGGNICNGAT SADSATPTLI YDAKLEIHSP HGVRFVPING FHTGPGKVSL EHDEILVAFH FPPQPKEHAG SAHFKYAMRD AMDISTIGCA AHCRLDNGNF SELRLAFGVA APTPIRCQHA EHTAQNAPLN LQTLEAISES VLQDVAPRSS WRASKEFRLH LIQTMTKKVI SEAVAAAGGK LQ
|
| |