Gene EcE24377A_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3092 
Symbol 
ID5589456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3099483 
End bp3100823 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content54% 
IMG OID640926734 
Productglucarate dehydratase 
Protein accessionYP_001464110 
Protein GI157157733 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID[TIGR03247] glucarate dehydratase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.026036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAC AATCCAGTCC TGTTATTACT GATATGAAAG TCATTCCGGT CGCCGGGCAC 
GATAGCATGT TGCTTAATAT TGGTGGGGCA CATAACGCAT ATTTCACCCG CAATATTGTG
GTACTCACCG ATAACGCCGG GCATACCGGC ATTGGTGAAG CGCCGGGCGG AGAGGTGATT
TATCAAACAC TGGTCGATGC TATTCCGATG GTTCTGGGCC AGGAAGTTGC GCGCCTGAAT
AAAGTGGTTC AGCAGGTGCA TAAAGGTAAT CAGGCAGCCG ATTTTGATAC CTTCGGCAAA
GGTGCCTGGA CTTTTGAATT GCGCGTTAAT GCCGTGGCGG CGCTGGAAGC CGCCTTGCTT
GACCTGCTAG GTAAGGCGCT GAATGTTCCG GTCTGCGAAC TGTTGGGGCC AGGCAAGCAA
CGCGAGACTA TTACCGTCCT CGGTTATCTG TTTTATATCG GTGATCGGAC CAAAACCGAT
CTTCCTTATC TGGAAAATAC GCCGGGCAAC CATGAGTGGT ATCAGTTGCG CCATCAGAAA
GCGATGAACA GCGAAGCCGT TGTGCGTCTG GCGGAAGCCT CACAGGATCG CTATGGCTTT
AAAGATTTCA AACTTAAGGG CGGGGTGTTA CCTGGCGAGC AAGAAATCGA CACTGTTCGT
GCATTGAAGA AACGCTTCCC TGATGCGCGG ATTACCGTTG ATCCCAACGG TGCCTGGCTA
CTTGATGAAG CCATTTCTCT ATGCAAAGGG CTGAATGATG TTCTTACCTA TGCCGAAGAT
CCATGCGGCG CAGAACAGGG TTTCTCCGGT CGTGAAGTTA TGGCGGAGTT TCGGCGGGCG
ACCGGCTTGC CCGTCGCGAC TAACATGATC GCCACCAACT GGCGCGAAAT GGGTCATGCG
GTGATGCTCA ATGCGGTAGA TATTCCACTT GCCGATCCGC ACTTCTGGAC TCTTTCCGGT
GCAGTCCGTG TGGCGCAGCT TTGCGACGAC TGGGGGCTGA CCTGGGGCTG CCATTCTAAT
AACCATTTCG ATATCTCTCT GGCGATGTTT ACCCATGTGG GCGCGGCGGC ACCGGGTAAT
CCTACCGCTA TCGATACCCA CTGGATTTGG CAGGAGGGCG ATTGTCGCCT GACCAAAAAT
CCGCTGGAGA TTAAAAACGG AAAAATTGCC GTTCCTGATG CGCCCGGTCT GGGCGTGGAA
CTGGACTGGG AACAGGTACA AAAGGCACAT GAGGCCTATA AACGTCTGCC TGTCGGTGCG
CGTAACGACG CAGGTCCGAT GCAGTACCTG ATCCCCGGCT GGACCTTTGA CCGTAAACGT
CCCGTTTTCG GCCGTCATTG A
 
Protein sequence
MTTQSSPVIT DMKVIPVAGH DSMLLNIGGA HNAYFTRNIV VLTDNAGHTG IGEAPGGEVI 
YQTLVDAIPM VLGQEVARLN KVVQQVHKGN QAADFDTFGK GAWTFELRVN AVAALEAALL
DLLGKALNVP VCELLGPGKQ RETITVLGYL FYIGDRTKTD LPYLENTPGN HEWYQLRHQK
AMNSEAVVRL AEASQDRYGF KDFKLKGGVL PGEQEIDTVR ALKKRFPDAR ITVDPNGAWL
LDEAISLCKG LNDVLTYAED PCGAEQGFSG REVMAEFRRA TGLPVATNMI ATNWREMGHA
VMLNAVDIPL ADPHFWTLSG AVRVAQLCDD WGLTWGCHSN NHFDISLAMF THVGAAAPGN
PTAIDTHWIW QEGDCRLTKN PLEIKNGKIA VPDAPGLGVE LDWEQVQKAH EAYKRLPVGA
RNDAGPMQYL IPGWTFDRKR PVFGRH