| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3090 |
|---|
| Symbol | barA |
|---|
| ID | 5590424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 3095134 |
|---|
| End bp | 3097890 |
|---|
| Gene Length | 2757 bp |
|---|
| Protein Length | 918 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640926732 |
|---|
| Product | hybrid sensory histidine kinase BarA |
|---|
| Protein accession | YP_001464108 |
|---|
| Protein GI | 157159173 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4999] Uncharacterized domain of BarA-like signal transduction histidine kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000398111 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACT ACAGCCTGCG CGCACGCATG ATGATTCTGA TCCTGGCACC GACCGTCCTT
ATTGGTTTAT TGCTGAGTAT CTTTTTCGTC GTGCATCGCT ATAACGACTT GCAGCGTCAA
CTGGAAGATG CCGGTGCCAG CATTATTGAG CCGCTTGCAG TTTCTACTGA ATATGGCATG
AGCCTGCAAA ATCGCGAATC TATCGGTCAG TTAATAAGCG TACTGCATCG TCGCCATTCC
GATATTGTTC GCGCGATTTC GGTTTATGAT GAAAATAACC GACTCTTTGT CACCTCCAAT
TTTCATCTTG ATCCCTCATC AATGCAGCTC GGCAGCAACG TGCCGTTTCC TCGCCAGCTC
ACTGTCACTC GTGACGGCGA TATTATGATC CTCCGCACGC CGATTATTTC TGAGAGTTAC
TCCCCCGACG AATCGCCCAG TAGCGATGCC AAAAATAGTC AAAATATGTT GGGATATATT
GCGCTTGAGC TGGATCTTAA ATCGGTTCGC TTGCAGCAAT ATAAAGAGAT CTTTATTTCC
AGCGTGATGA TGCTGTTTTG TATCGGTATT GCGCTTATTT TTGGCTGGCG CTTAATGCGC
GATGTAACCG GTCCGATTCG CAACATGGTG AATACCGTCG ACCGCATCCG TCGCGGGCAA
CTCGACAGCC GGGTGGAAGG ATTTATGCTC GGCGAGCTGG ATATGCTGAA AAACGGTATC
AACTCGATGG CAATGTCGCT GGCTGCTTAT CACGAAGAGA TGCAGCACAA TATCGACCAG
GCGACGTCCG ATCTGCGTGA AACGCTGGAG CAGATGGAAA TTCAGAACGT TGAGTTAGAT
CTGGCGAAAA AGCGCGCCCA GGAAGCGGCG CGTATTAAAT CCGAGTTTCT GGCAAATATG
TCACACGAGC TGCGTACACC ACTGAATGGT GTTATTGGCT TTACCCGCCT GACGCTGAAA
ACAGAATTAA CACCAACGCA GCGCGATCAC CTGAATACGA TTGAACGTTC GGCAAATAAT
TTGCTGGCAA TTATTAATGA TGTTCTCGAC TTCTCGAAAC TGGAAGCAGG TAAGCTGATT
CTGGAAAGTA TTCCATTCCC ACTACGCAGC ACGCTGGATG AAGTCGTTAC TCTGCTGGCA
CATTCTTCTC ACGATAAAGG GTTGGAACTG ACGCTCAATA TTAAAAGCGA CGTGCCTGAT
AACGTGATCG GCGACCCACT GCGATTACAG CAAATCATCA CTAACCTGGT GGGGAATGCA
ATTAAATTCA CCGAGAATGG CAACATTGAT ATTCTGGTAG AAAAACGTGC GCTGAGTAAT
ACCAAAGTGC AGATTGAAGT GCAGATTCGG GATACCGGCA TTGGTATTCC TGAACGCGAT
CAATCGCGCT TATTCCAGGC CTTCCGACAG GCTGATGCCA GTATTTCCCG CCGTCATGGT
GGCACCGGTC TGGGGCTGGT GATTACACAA AAACTGGTTA ATGAAATGGG CGGCGATATT
TCGTTCCATA GCCAGCCGAA TCGCGGTTCA ACTTTCTGGT TCCACATTAA TCTCGATCTG
AACCCGAACA TTATTATCGA AGGGCCATCC ACCCAGTGCC TCGCCGGTAA GCGCCTGGCC
TATGTCGAAC CAAACTCCGC AGCAGCGCAA TGCACGCTGG ATATTTTAAG TGAAACGCCG
CTGGAAGTGG TTTATAGCCC AACGTTCTCC GCGCTGCCTC CCGCGCATTA CGACATGATG
TTGTTAGGCA TCGCGGTGAC CTTCCGCGAG CCGCTAACAA TGCAACATGA GCGATTAGCG
AAAGCGGTAT CGATGACCGA TTTCCTGATG CTGGCACTTC CTTGCCATGC ACAAGTCAAT
GCAGAAAAAC TCAAGCAAGA TGGTATCGGC GCGTGTCTGC TGAAACCATT AACACCTACG
CGCCTGTTGC CTGCCCTGAC GGAATTTTGT CATCACAAAC AAAACACGCT TTTGCCTGTA
ACCGATGAAA GCAAGCTGGC AATGACAGTC ATGGCAGTTG ATGACAACCC CGCTAACCTG
AAACTTATCG GCGCATTGCT GGAAGATATG GTGCAACATG TGGAACTTTG CGATAGCGGG
CATCAGGCGG TTGAACGGGC GAAACAGATG CCGTTCGATT TGATCTTAAT GGATATTCAA
ATGCCTGACA TGGATGGCAT TCGGGCCTGC GAGCTCATCC ACCAGCTCCC CCATCAGCAA
CAAACGCCGG TTATCGCGGT AACGGCGCAT GCAATGGCCG GGCAAAAAGA GAAGCTGCTT
GGCGCAGGGA TGAGCGATTA TCTGGCGAAA CCGATTGAAG AAGAGCGATT GCATAATTTG
TTGTTGCGCT ACAAGCCTGG CAGCGGTATT TCCTCTCGCG TCGTGACGCC CGAAGTCAAC
GAAATTGTGG TGAACCCGAA TGCGACCCTC GACTGGCAAC TGGCACTACG CCAGGCAGCA
GGAAAAACCG ATTTAGCGCG CGATATGCTG CAAATGTTAC TCGATTTCCT GCCTGAAGTT
CGCAACAAAG TTGAGGAACA GCTGGTTGGA GAAAACCCGG AAGGCCTGGT TGATTTGATT
CATAAACTGC ATGGCAGTTG CGGCTATAGC GGTGTGCCGC GTATGAAGAA TCTCTGCCAA
CTGATCGAAC AACAGCTACG TAGCGGTACT AAAGAAGAAG ATTTGGAGCC GGAGCTGCTG
GAACTGTTGG ACGAGATGGA TAATGTAGCG CGCGAAGCCA GCAAAATTCT CGGGTAA
|
|---|
| Protein sequence | MTNYSLRARM MILILAPTVL IGLLLSIFFV VHRYNDLQRQ LEDAGASIIE PLAVSTEYGM
SLQNRESIGQ LISVLHRRHS DIVRAISVYD ENNRLFVTSN FHLDPSSMQL GSNVPFPRQL
TVTRDGDIMI LRTPIISESY SPDESPSSDA KNSQNMLGYI ALELDLKSVR LQQYKEIFIS
SVMMLFCIGI ALIFGWRLMR DVTGPIRNMV NTVDRIRRGQ LDSRVEGFML GELDMLKNGI
NSMAMSLAAY HEEMQHNIDQ ATSDLRETLE QMEIQNVELD LAKKRAQEAA RIKSEFLANM
SHELRTPLNG VIGFTRLTLK TELTPTQRDH LNTIERSANN LLAIINDVLD FSKLEAGKLI
LESIPFPLRS TLDEVVTLLA HSSHDKGLEL TLNIKSDVPD NVIGDPLRLQ QIITNLVGNA
IKFTENGNID ILVEKRALSN TKVQIEVQIR DTGIGIPERD QSRLFQAFRQ ADASISRRHG
GTGLGLVITQ KLVNEMGGDI SFHSQPNRGS TFWFHINLDL NPNIIIEGPS TQCLAGKRLA
YVEPNSAAAQ CTLDILSETP LEVVYSPTFS ALPPAHYDMM LLGIAVTFRE PLTMQHERLA
KAVSMTDFLM LALPCHAQVN AEKLKQDGIG ACLLKPLTPT RLLPALTEFC HHKQNTLLPV
TDESKLAMTV MAVDDNPANL KLIGALLEDM VQHVELCDSG HQAVERAKQM PFDLILMDIQ
MPDMDGIRAC ELIHQLPHQQ QTPVIAVTAH AMAGQKEKLL GAGMSDYLAK PIEEERLHNL
LLRYKPGSGI SSRVVTPEVN EIVVNPNATL DWQLALRQAA GKTDLARDML QMLLDFLPEV
RNKVEEQLVG ENPEGLVDLI HKLHGSCGYS GVPRMKNLCQ LIEQQLRSGT KEEDLEPELL
ELLDEMDNVA REASKILG
|
|---|
| |