Gene EcE24377A_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_3058 
Symbolcse3 
ID5587602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp3058538 
End bp3059188 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content55% 
IMG OID640926702 
ProductCRISPR-associated Cse3 family protein 
Protein accessionYP_001464078 
Protein GI157155574 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTCT CAAGAATAAC CTTACATACC GGCCAGCTTT CCCCAGCGCA GTTGCTGCAT 
CTGGTGGATC GCGGTGAATA TGTGATGCAT CAGTGGCTGT GGGATCTCTT CCCTGGCGGC
AAAGAAAGGC AATTTCTTTA TCGTCGGGAA GAACTCCAGG GCGCGTTTCG CTTTTTTGTC
CTCTCGCAGG AACGCCCGGC GGAAAGTGAA ACTTTCACCA TCGAATGCCG ACCATTTGTG
TCCGAGCTGC GTACCGGACA ATCTCTTTGT TTCAACCTGC GGGCGAATCC AACAATCTGT
AAAGCGGGCA AGCGCTACGA TCTGCTGATG GAGGCGAAAC GGCAGGTGAA GGGGCAGGCG
GAAGGGCGTG ATATCTGGTT GCATCAACAA CAGGCGGCGC TGGACTGGCT GGCAGCGCAG
GGGGAAAGAA GTGGTTTTAC ACTACTGGAT ACCTCGGTTG ATGCCTACCG ACAACAACAA
CTCCGGCGGG AAAACACCCG GCAACTGATC CAGTTCAGTA GCGTGGATTA TACGGGGATG
CTTACGGTCA CCGATCCTGG GTTATTTCTG CAACGTCTGA GCCAGGGGTA TGGCAAAAGC
CGGGCGTTCG GCTGTGGTCT GATGCTGATC AAACCCGGAG CCGAGGCGTG A
 
Protein sequence
MYLSRITLHT GQLSPAQLLH LVDRGEYVMH QWLWDLFPGG KERQFLYRRE ELQGAFRFFV 
LSQERPAESE TFTIECRPFV SELRTGQSLC FNLRANPTIC KAGKRYDLLM EAKRQVKGQA
EGRDIWLHQQ QAALDWLAAQ GERSGFTLLD TSVDAYRQQQ LRRENTRQLI QFSSVDYTGM
LTVTDPGLFL QRLSQGYGKS RAFGCGLMLI KPGAEA