| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2979 |
|---|
| Symbol | csrA |
|---|
| ID | 5590395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 2979455 |
|---|
| End bp | 2979640 |
|---|
| Gene Length | 186 bp |
|---|
| Protein Length | 61 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640926627 |
|---|
| Product | carbon storage regulator |
|---|
| Protein accession | YP_001464003 |
|---|
| Protein GI | 157158815 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
|---|
| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000170939 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTC TGACTCGTCG AGTTGGTGAG ACCCTCATGA TTGGGGATGA GGTCACCGTG
ACAGTTTTAG GGGTAAAGGG CAACCAGGTA CGTATTGGCG TAAATGCCCC GAAGGAAGTT
TCTGTTCACC GTGAAGAGAT CTACCAGCGT ATCCAGGCTG AAAAATCCCA GCAGTCCAGT
TACTAA
|
|---|
| Protein sequence | MLILTRRVGE TLMIGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR IQAEKSQQSS
Y
|
|---|
| |