Gene EcE24377A_2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2881 
Symbol 
ID5589011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2885773 
End bp2886510 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID640926533 
Productouter membrane protein assembly complex subunit YfiO 
Protein accessionYP_001463916 
Protein GI157155227 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0417969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCA TGAAATATCT GGTGGCAGCC GCCACACTAA GCCTGTTTTT GGCGGGTTGC 
TCGGGGTCAA AGGAAGAAGT ACCTGATAAT CCGCCAAATG AAATTTACGC GACTGCACAA
CAAAAGCTGC AGGACGGTAA CTGGAGACAG GCAATAACGC AACTGGAAGC GTTAGATAAT
CGCTATCCGT TTGGTCCGTA TTCGCAGCAG GTGCAGCTGG ATCTCATCTA CGCCTACTAT
AAAAACGCCG ATTTGCCGTT AGCGCAGGCT GCCATCGATC GTTTTATTCG CCTTAACCCG
ACCCATCCGA ATATCGATTA TGTCATGTAC ATGCGTGGCC TGACCAATAT GGCGCTGGAT
GACAGTGCGC TGCAAGGGTT CTTTGGCGTT GACCGTAGCG ATCGCGATCC TCAACATGCA
CGAGCTGCGT TTAGTGACTT TTCCAAACTG GTGCGCGGCT ATCCAAACAG TCAGTACACC
ACCGATGCCA CCAAACGTCT GGTATTCCTG AAAGATCGTC TGGCGAAATA TGAATACTCC
GTGGCCGAGT ACTATACAGA ACGTGGCGCA TGGGTTGCCG TCGTTAACCG CGTAGAAGGA
ATGTTGCGCG ACTACCCGGA TACCCAGGCT ACGCGTGATG CGCTGCCGCT GATGGAAAAT
GCATACCGTC AGATGCAGAT GAATGCGCAA GCTGAAAAAG TAGCGAAAAT CATCGCCGCA
AACAGCAGCA ATACATAA
 
Protein sequence
MTRMKYLVAA ATLSLFLAGC SGSKEEVPDN PPNEIYATAQ QKLQDGNWRQ AITQLEALDN 
RYPFGPYSQQ VQLDLIYAYY KNADLPLAQA AIDRFIRLNP THPNIDYVMY MRGLTNMALD
DSALQGFFGV DRSDRDPQHA RAAFSDFSKL VRGYPNSQYT TDATKRLVFL KDRLAKYEYS
VAEYYTERGA WVAVVNRVEG MLRDYPDTQA TRDALPLMEN AYRQMQMNAQ AEKVAKIIAA
NSSNT