Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2582 |
Symbol | lrhA |
ID | 5589406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2576145 |
End bp | 2577083 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640926238 |
Product | transcriptional regulator LrhA |
Protein accession | YP_001463632 |
Protein GI | 157159005 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.210285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGTG CAAATCGTCC GATAATTAAC CTCGACCTCG ATCTGCTGAG AACATTTGTT GCTGTTGCCG ATCTGAACAC TTTTGCTGCC GCAGCTGCCG CTGTGTGTCG TACTCAGTCC GCCGTAAGTC AGCAAATGCA GCGTCTGGAA CAACTCGTTG GGAAAGAACT GTTCGCTCGT CACGGTCGCA ACAAACTGTT AACTGAACAT GGCATTCAAC TTCTTGGTTA CGCCAGGAAA ATCCTGCGTT TTAATGATGA GGCCTGCTCA TCATTAATGT TCAGTAATCT TCAGGGCGTG TTAACTATCG GTGCTTCAGA TGAATCTGCC GATACGATCT TACCTTTCCT GTTAAATCGC GTGAGTTCGG TTTATCCGAA ATTAGCGCTG GATGTCCGCG TTAAACGTAA TGCCTATATG GCAGAAATGC TGGAATCCCA GGAAGTGGAT TTGATGGTAA CCACCCATCG TCCTTCAGCG TTTAAGGCAT TGAACCTGCG AACCTCGCCA ACACACTGGT ACTGCGCAGC GGAATACGTA TTGCAAAAAG GCGAGCCGAT CCCTCTTGTA TTGCTGGATG ATCCAAGTCC GTTTCGCGAT ATGGTGCTGG CGACGCTTAA TAAAGCAGAT ATTCCATGGC GACTGGCTTA TGTCGCCTCG ACGCTTCCGG CCGTTCGTGC GGCAGTGAAA GCCGGTCTTG GCGTGACGGC AAGGCCGGTT GAGATGATGA GCCCGGACCT GCGTGTGCTG AGTGGAGTAG ATGGCTTACC GCCGCTACCT GATACCGAAT ATTTGCTGTG CTATGACCCG TCCAGTAATA ATGAGCTGGC CCAGGTGATC TATCAGGCGA TGGAGAGCTA CCATAATCCG TGGCAATACA GCCCAATGTC TGCTCCGGAA GGGGATGATT CATTGTTGAT TGAAAGGGAT ATCGAGTAA
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Protein sequence | MISANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR HGRNKLLTEH GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLNR VSSVYPKLAL DVRVKRNAYM AEMLESQEVD LMVTTHRPSA FKALNLRTSP THWYCAAEYV LQKGEPIPLV LLDDPSPFRD MVLATLNKAD IPWRLAYVAS TLPAVRAAVK AGLGVTARPV EMMSPDLRVL SGVDGLPPLP DTEYLLCYDP SSNNELAQVI YQAMESYHNP WQYSPMSAPE GDDSLLIERD IE
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