Gene EcE24377A_2579 details

Gene Information

• Locus tag: EcE24377A_2579
• Symbol: nuoC
• ID: 5587429
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: -
• Start bp: 2572497
• End bp: 2574299
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640926235
• Product: bifunctional NADH:ubiquinone oxidoreductase subunit C/D
• Protein accession: YP_001463629
• Protein GI: 157158752
• COG category: [C] Energy production and conversion
• COG ID: [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7; [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C; [TIGR01962] NADH dehydrogenase I, D subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.144655
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGAACA ATATGACCGA CTTAACCGCG CAAGAACCCG CCTGGCAGAC CCGCGATCAT 
CTTGATGATC CGGTAATTGG CGAACTGCGC AACCGTTTTG GGCCGGATGC CTTTACTGTT 
CAGGCGACTC GCACCGGGGT TCCCGTTGTG TGGATCAAGC GTGAACAATT ACTGGAAGTT 
GGCGATTTCT TAAAGAAACT GCCGAAACCT TACGTCATGC TGTTTGACTT ACACGGCATG 
GACGAACGTC TGCGCACACA CCGCGAAGGG TTACCTGCCG CGGATTTTTC CGTTTTCTAC 
CATCTGATTT CTATCGATCG TAACCGCGAC ATCATGCTGA AGGTGGCGCT GGCAGAAAAC 
GACCTGCACG TACCGACCTT CACCAAACTG TTCCCGAACG CTAACTGGTA TGAGCGTGAA 
ACCTGGGATC TGTTTGGCAT TACTTTCGAC GGTCACCCGA ACCTGCGCCG CATCATGATG 
CCGCAAACCT GGAAAGGTCA CCCGCTGCGT AAAGATTACC CGGCGCGCGC TACCGAATTC 
TCGCCGTTTG AGCTGACCAA AGCCAAACAG GATCTGGAGA TGGAAGCCCT GACCTTCAAA 
CCGGAAGAGT GGGGGATGAA GCGCGGCACC GAAAACGAGG ACTTCATGTT CCTCAACCTC 
GGTCCGAACC ACCCGTCGGC GCACGGGGCT TTCCGTATCG TTTTACAACT CGACGGCGAA 
GAGATTGTCG ACTGCGTACC AGACATCGGC TACCACCACC GTGGTGCGGA GAAAATGGGC 
GAGCGCCAGT CCTGGCACAG CTACATTCCG TATACCGACC GTATTGAATA CCTCGGCGGC 
TGCGTTAACG AAATGCCTTA CGTGCTGGCG GTAGAGAAAC TGGCCGGGAT CACCGTGCCG 
GATCGCGTTA ACGTCATTCG CGTTATGCTC TCCGAACTGT TCCGTATCAA CAGCCACCTG 
CTGTACATCT CGACCTTTAT TCAGGACGTC GGCGCAATGA CGCCCGTGTT CTTCGCCTTT 
ACCGATCGTC AGAAAATTTA CGATCTGGTG GAAGCGATCA CGGGTTTCCG TATGCACCCG 
GCGTGGTTCC GTATTGGCGG CGTAGCGCAC GACCTGCCGC GCGGCTGGGA TCGCCTGCTG 
CGTGAGTTCC TCGACTGGAT GCCGAAACGT CTGGCGTCTT ACGAGAAAGC GGCGCTGCAA 
AATACCATTC TGAAAGGTCG TTCCCAGGGC GTTGCCGCCT ATGGCGCGAA AGAGGCGCTG 
GAGTGGGGCA CCACTGGCGC GGGCCTGCGT GCTACCGGGA TCGACTTCGA CGTGCGTAAG 
GCGCGTCCTT ATTCTGGCTA TGAAAACTTC GACTTTGAAA TCCCGGTTGG TGGTGGTGTT 
TCTGACTGCT ACACCCGCGT AATGCTGAAA GTGGAAGAGC TGCGCCAGAG TCTGCGCATT 
CTTGAGCAGT GCCTCAACAA CATGCCGGAA GGCCCGTTCA AAGCGGATCA CCCGCTGACC 
ACGCCGCCGC CGAAAGAGCG CACGCTGCAA CATATCGAAA CCCTGATCAC CCACTTCCTG 
CAAGTGTCGT GGGGGCCGGT GATGCCTGCC AATGAATCTT TCCAGATGAT TGAGGCGACC 
AAGGGGATCA ACAGTTACTA CCTGACCAGC GACGGTAGCA CCATGAGTTA TCGCACTCGT 
ATCCGCACGC CGAGTTATGC GCATTTGCAG CAAATTCCGG CGGCGATCCG CGGCAGCCTG 
GTGTCTGACC TGATTGTTTA TCTGGGCAGT ATCGATTTTG TTATGTCAGA TGTGGACCGC 
TAA 

 

Protein sequence

MVNNMTDLTA QEPAWQTRDH LDDPVIGELR NRFGPDAFTV QATRTGVPVV WIKREQLLEV 
GDFLKKLPKP YVMLFDLHGM DERLRTHREG LPAADFSVFY HLISIDRNRD IMLKVALAEN 
DLHVPTFTKL FPNANWYERE TWDLFGITFD GHPNLRRIMM PQTWKGHPLR KDYPARATEF 
SPFELTKAKQ DLEMEALTFK PEEWGMKRGT ENEDFMFLNL GPNHPSAHGA FRIVLQLDGE 
EIVDCVPDIG YHHRGAEKMG ERQSWHSYIP YTDRIEYLGG CVNEMPYVLA VEKLAGITVP 
DRVNVIRVML SELFRINSHL LYISTFIQDV GAMTPVFFAF TDRQKIYDLV EAITGFRMHP 
AWFRIGGVAH DLPRGWDRLL REFLDWMPKR LASYEKAALQ NTILKGRSQG VAAYGAKEAL 
EWGTTGAGLR ATGIDFDVRK ARPYSGYENF DFEIPVGGGV SDCYTRVMLK VEELRQSLRI 
LEQCLNNMPE GPFKADHPLT TPPPKERTLQ HIETLITHFL QVSWGPVMPA NESFQMIEAT 
KGINSYYLTS DGSTMSYRTR IRTPSYAHLQ QIPAAIRGSL VSDLIVYLGS IDFVMSDVDR