| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2517 |
|---|
| Symbol | rcsB |
|---|
| ID | 5587582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | + |
|---|
| Start bp | 2502514 |
|---|
| End bp | 2503164 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640926174 |
|---|
| Product | transcriptional regulator RcsB |
|---|
| Protein accession | YP_001463568 |
|---|
| Protein GI | 157155457 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000600529 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAATA TGAACGTAAT TATTGCCGAT GACCATCCGA TAGTCTTGTT CGGTATTCGC
AAATCACTTG AGCAAATTGA GTGGGTGAAT GTTGTCGGCG AATTTGAAGA CTCTACAGCA
CTGATCAACA ACCTGCCGAA ACTGGATGCG CATGTGTTGA TTACCGATCT CTCCATGCCT
GGCGATAAGT ACGGCGATGG CATTACCTTA ATCAAGTACA TCAAGCGCCA TTTCCCAAGC
CTGTCGATTA TTGTTCTGAC CATGAACAAC AACCCGGCGA TTCTTAGTGC GGTATTGGAT
CTGGATATCG AAGGGATCGT GCTGAAACAA GGTGCACCGA CCGATCTGCC GAAAGCTCTC
GCCGCGCTGC AGAAAGGGAA GAAATTTACC CCGGAAAGCG TTTCTCGCCT GTTGGAAAAA
ATCAGTGCTG GTGGTTACGG TGACAAGCGT CTCTCGCCAA AAGAGAGTGA AGTTCTGCGC
CTGTTTGCGG AAGGCTTCCT GGTGACCGAG ATCGCTAAAA AGCTGAACCG CAGTATTAAA
ACCATCAGTA GCCAGAAGAA ATCTGCGATG ATGAAGCTGG GTGTCGAGAA CGATATCGCC
CTGCTGAATT ATCTCTCTTC TGTGACGTTA AGTCCGGCAG ATAAAGACTA A
|
|---|
| Protein sequence | MNNMNVIIAD DHPIVLFGIR KSLEQIEWVN VVGEFEDSTA LINNLPKLDA HVLITDLSMP
GDKYGDGITL IKYIKRHFPS LSIIVLTMNN NPAILSAVLD LDIEGIVLKQ GAPTDLPKAL
AALQKGKKFT PESVSRLLEK ISAGGYGDKR LSPKESEVLR LFAEGFLVTE IAKKLNRSIK
TISSQKKSAM MKLGVENDIA LLNYLSSVTL SPADKD
|
|---|
| |