| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2514 |
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| Symbol | ompC |
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| ID | 5587201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 2497995 |
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| End bp | 2499086 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640926172 |
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| Product | outer membrane porin protein C |
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| Protein accession | YP_001463566 |
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| Protein GI | 157157896 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000192905 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA AAGTACTGTC CCTCCTGGTC CCAGCTCTGC TGGTAGCAGG CGCAGCAAAC
GCTGCTGAAG TTTACAACAA AGACGGCAAC AAATTAGATC TGTACGGTAA AGTAGACGGC
CTGCACTATT TCTCTGACAA CAAAGATGTA GATGGCGACC AGACCTACAT GCGTCTTGGC
TTCAAAGGTG AAACTCAGGT TACTGACCAG CTGACCGGTT ACGGCCAGTG GGAATATCAG
ATCCAGGGCA ACAGCGCTGA AAACGAAAAC AACTCCTGGA CCCGTGTGGC ATTCGCAGGT
CTGAAATTCC AGGATGTAGG TTCTTTCGAC TACGGTCGTA ACTACGGCGT TGTTTACGAC
GTAACTTCCT GGACCGACGT ACTGCCAGAA TTCGGTGGCG ACACTTACGG TTCTGACAAC
TTCATGCAGC AGCGTGGTAA CGGTTTCGCG ACCTACCGTA ACACTGACTT CTTCGGTCTG
GTTGACGGCC TGAACTTTGC TGTTCAGTAC CAGGGCAAAA ACGGTAGCGT AAGCGGCGAA
GGCATGACTA ACAACGGTCG TGAAGCACTG CGTCAGAACG GCGACGGCGT TGGCGGATCT
ATCACTTATG ATTACGAAGG CTTCGGTATC GGTGCTGCAG TTTCCAGCTC CAAACGTACT
GATGATCAGA ACAGCCCGCT GTACATCGGT AACGGCGACC GTGCTGAAAC CTACACTGGT
GGTCTGAAAT ACGACGCTAA CAACATCTAC CTGGCTGCTC AGTACACCCA GACCTACAAC
GCAACTCGCG TAGGTTCCCT GGGTTGGGCG AACAAAGCAC AGAACTTCGA AGCTGTTGCT
CAGTACCAGT TCGACTTTGG TCTGCGTCCG TCCCTGGCTT ACCTGCAGTC TAAAGGTAAA
AACCTGGGTC GTGGCTACGA CGACGAAGAT ATCCTGAAAT ATGTTGATGT TGGTGCGACC
TACTACTTCA ACAAAAACAT GTCCACCTAT GTTGACTACA AAATCAACCT GCTGGACGAC
AACCAGTTCA CTCGTGACGC TGGCATCAAC ACTGATAACA TCGTAGCTCT GGGTCTGGTT
TACCAGTTCT AA
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| Protein sequence | MKVKVLSLLV PALLVAGAAN AAEVYNKDGN KLDLYGKVDG LHYFSDNKDV DGDQTYMRLG
FKGETQVTDQ LTGYGQWEYQ IQGNSAENEN NSWTRVAFAG LKFQDVGSFD YGRNYGVVYD
VTSWTDVLPE FGGDTYGSDN FMQQRGNGFA TYRNTDFFGL VDGLNFAVQY QGKNGSVSGE
GMTNNGREAL RQNGDGVGGS ITYDYEGFGI GAAVSSSKRT DDQNSPLYIG NGDRAETYTG
GLKYDANNIY LAAQYTQTYN ATRVGSLGWA NKAQNFEAVA QYQFDFGLRP SLAYLQSKGK
NLGRGYDDED ILKYVDVGAT YYFNKNMSTY VDYKINLLDD NQFTRDAGIN TDNIVALGLV
YQF
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