| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_2360 |
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| Symbol | |
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| ID | 5590152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | + |
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| Start bp | 2326371 |
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| End bp | 2329688 |
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| Gene Length | 3318 bp |
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| Protein Length | 1105 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640926025 |
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| Product | putative sensor protein |
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| Protein accession | YP_001463420 |
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| Protein GI | 157155968 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3447] Predicted integral membrane sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAC AATCACAGCA TGTATTAATT GCCCTGCCCC ACCCGCTGCT TCACCTGGTC
AGTTTAGGTT TAGTCTCGTT TATCTTTACC CTTTTCTCGC TTGAGCTTTC GCAGTTTGGC
ACCCAACTCG CCCCACTGTG GTTCCCGACG TCCATCATGA TGGTGGCGTT TTATCGCCAT
GCCGGGCGCA TGTGGCCGGG AATTGCGCTG AGCTGTTCGC TGGGAAATAT CGCCGCATCC
ATCCTGCTTT TTTCCACCAG CTCGCTGAAC ATGACCTGGA CGACCATCAA TATTGTTGAA
GCCGTGGTCG GGGCAGTGCT GCTACGTAAA TTGCTGCCGT GGTATAACCC CTTGCAAAAT
CTGGCTGACT GGCTGCGTCT GGCACTCGGC AGCGCCATTG TTCCGCCTCT GTTGGGGGGG
GGTCTGGTTG TCCTGCTGAC GGCCGGAGAC GATCCTCTCA GGGCATTTTT GATATGGGTA
CTGTCAGAAT CCATCGGCGC TCTGGCACTG GTGCCGCTGG GATTGTTATT TAAACCACAC
TATCTGCTGC GCCATCGCAA CCCACGGTTG CTTTTTGAGT CGCTGCTCAC GTTAGCCATC
ACACTGACGT TAAGCTGGCT TTCGATGCTG TATCTGCCGT GGCCTTTTAC TTTCATTATT
GTGCTGTTGA TGTGGAGCGC CGTGCGCCTG CCACGAATGG AAGCCTTTTT GATCTTCCTT
ACCACGGTGA TGATGGTGTC GCTGATGATG GCCGCGGATC CCTCCCTGCT TGCTACGCCG
CGTACATACC TGATGAGCCA TATGCCGTGG CTACCGTTTT TGCTGATCCT GCTGCCCGCC
AACATCATGA CGATGGTGAT GTATGCCTTT CGTGCGGAAC GCAAACACAT TTCCGAAAGC
GAAACCCGTT TTCGGAACGC CATGGAATAT TCCGCTATCG GTATGGCGTT AGTGGGCACC
GAGGGACAAT GGCTGCAAAC CAACAAAGCG CTCTGCCAGT TTCTCGGGTA CAGTCAGGAA
GAGCTGCGCG GACTCACCTT TCAGCAACTG ACCTGGCCGG AGGATCTCAA TAAAGATCTC
CAACAGGTTG AAAAGCTGAT AAGCGGTGAA ATAAACACCT ATTCAATGGA AAAACGCTAC
TACAACCGCA ATGGCGATGT TGTCTGGGCG TTGCTTGCCG TCTCACTGGT GCGCCACACG
GATGGCACGC CGCTCTATTT TATCGCTCAG ATTGAAGACA TTAACGAGCT AAAACGCACC
GAACAGGTGA ATCAGCAACT GATGGAGCGC ATCACGCTGG CTAACGAAGC GGGCGGGATT
GGCATCTGGG AGTGGGAGTT GAAGCCGAAT ATTTTTAGCT GGGATAAGCG GATGTTCGAG
CTGTATGAAA TTCCTCCACA TATCAAACCG AACTGGCAGG TGTGGTACGA GTGCGTGCTG
CCGGAAGATC GCCAGCATGC CGAAAAAGTG ATTCGTGATT CGTTGCAATC ACGCTCGCCC
TTTAAACTGG AATTTCGCAT TACCGTAAAA GACGGTATTC GCCATATCCG CGCCCTCGCC
AACCGGGTAC TGAATAAAGA AGGCGAAGTC GAACGTCTCC TCGGCATCAA TATGGATATG
ACCGAAGTGA AACAGCTTAA CGAGGCATTG TTTCAGGAAA AAGAGCGCCT GCACATTACG
CTTGATTCCA TCGGTGAAGC CGTGGTCTGT ATTGATATGG CGATGAAAAT TACCTTTATG
AATCCAGTGG CGGAGAAGAT GAGCGGCTGG ACGCAGGAAG AAGCGTTAGG TGTTCCGCTC
CTGACGGTGT TGCATATTAC TTTTGGCGAC AACGGACCAT TAATGGAGAA CATTTACAGT
GCCGACACCT CACGTTCCGC AATCGAACAA GATGTGGTGT TGCACTGTCG GAGCGGCGGC
AGTTACGACG TGCATTACAG TATTACGCCG TTAAGTACTC TGGACGGCAG CAATATTGGT
TCGGTTCTGG TGATTCAGGA CGTCACCGAA TCACGCAAAA TGCTGCGCCA GCTGAGCTAC
AGCGCCTCCC ATGATGCACT GACGCATCTC GCCAATCGCG CCAGTTTTGA GAAGCAACTG
CGTATGCTGC TGCAAACGGT AAACAGTACA CATCAGCGAC ATGCCCTGGT GTTTATCGAT
CTTGATCGCT TTAAAGCGGT GAATGACAGC GCCGGGCATG CGGCGGGCGA CGCTTTGCTG
CGCGAACTGG CGTCGTTGAT GCTGAGTATG CTGCGTTCCA GCGACGTGCT GGCGCGACTC
GGTGGGGATG AATTTGGTCT GCTGCTACCA GACTGTAATG TTGAAAGCGC GCGTTTTATC
GCTACACGCA TTATCAGTGC CGTGAATGAC TATCACTTTA TATGGGAAGG CCGTGTGCAT
CGGGTAGGTG CCAGTGCCGG GATTACCTTG ATTGATGACA ACAATCATCA GGCGGCAGAA
GTGATGTCGC AGGCTGATAT CGCCTGTTAT GCCTCCAAAA ATGGTGGACG GGGCCGGGTG
ACGGTTTACG AACCACAGCA AGCTGCCGCA CATAGCGAAC GGGCGGCGAT GTCGCTTGAT
GAACAGTGGC GGATGATTAA AGAGAATCAG TTGATGATGA TGGCCCACGG TGTCGCTTCG
CCGCGGATCC CGGAAGCGCG TAATTTGTGG CTGATTTCGC TTAAACTCTG GAGTTGCGAA
GGCGAGATTA TTGATGAACA AAAATTTCGT CGTAGCTTCA GCGATCCGGC ACTTAGCCAT
GCTCTTGACC GACGGGTATT CCACGAATTT TTCCAGCTGG CCGCAAAAGC GGTTGCCAGT
AAAGGCATAA GCATCGCCCT CCCCCTTTCC GTTGCCGGTT TGAGTAGCGC CACGCTGGTG
AATGATCTGA TTGAGCAGCT GGAAAATAGC CCTCTACCAC CACGGTTATT ACACCTGATT
ATTCCGGCTG AAGCGATTTT AGATCACGCA GAAAGCGTGC AAAAACTGCG GCTGGCGGGA
TGTCGGATAG TGCTCAGCCA GGTGGGCCGC GATCTGCAAA TCTTCAACTC GCTGAAAGCG
AATATGGCAG ATTACCTGCT ACTTGATGGT GAGTTATGCG CCAACGTGCA GGGTAATTTG
ATGGATGAGA TGCTGATTAC GATTATTCAG GGGCACGCTC AGCGACTCGG GATGAAAACC
ATCGCCGGGC CAGTCGTTTT ACCCTTAGTG ATGGATACGC TTTCTGGCAT CGGCGTCGAT
CTGATTTATG GTGATGTGAT TGCCGATGCC CAACCGCTGG ATTTGCTGGT GAATAGCAGT
TATTTCGCGA TTAACTGA
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| Protein sequence | MSKQSQHVLI ALPHPLLHLV SLGLVSFIFT LFSLELSQFG TQLAPLWFPT SIMMVAFYRH
AGRMWPGIAL SCSLGNIAAS ILLFSTSSLN MTWTTINIVE AVVGAVLLRK LLPWYNPLQN
LADWLRLALG SAIVPPLLGG GLVVLLTAGD DPLRAFLIWV LSESIGALAL VPLGLLFKPH
YLLRHRNPRL LFESLLTLAI TLTLSWLSML YLPWPFTFII VLLMWSAVRL PRMEAFLIFL
TTVMMVSLMM AADPSLLATP RTYLMSHMPW LPFLLILLPA NIMTMVMYAF RAERKHISES
ETRFRNAMEY SAIGMALVGT EGQWLQTNKA LCQFLGYSQE ELRGLTFQQL TWPEDLNKDL
QQVEKLISGE INTYSMEKRY YNRNGDVVWA LLAVSLVRHT DGTPLYFIAQ IEDINELKRT
EQVNQQLMER ITLANEAGGI GIWEWELKPN IFSWDKRMFE LYEIPPHIKP NWQVWYECVL
PEDRQHAEKV IRDSLQSRSP FKLEFRITVK DGIRHIRALA NRVLNKEGEV ERLLGINMDM
TEVKQLNEAL FQEKERLHIT LDSIGEAVVC IDMAMKITFM NPVAEKMSGW TQEEALGVPL
LTVLHITFGD NGPLMENIYS ADTSRSAIEQ DVVLHCRSGG SYDVHYSITP LSTLDGSNIG
SVLVIQDVTE SRKMLRQLSY SASHDALTHL ANRASFEKQL RMLLQTVNST HQRHALVFID
LDRFKAVNDS AGHAAGDALL RELASLMLSM LRSSDVLARL GGDEFGLLLP DCNVESARFI
ATRIISAVND YHFIWEGRVH RVGASAGITL IDDNNHQAAE VMSQADIACY ASKNGGRGRV
TVYEPQQAAA HSERAAMSLD EQWRMIKENQ LMMMAHGVAS PRIPEARNLW LISLKLWSCE
GEIIDEQKFR RSFSDPALSH ALDRRVFHEF FQLAAKAVAS KGISIALPLS VAGLSSATLV
NDLIEQLENS PLPPRLLHLI IPAEAILDHA ESVQKLRLAG CRIVLSQVGR DLQIFNSLKA
NMADYLLLDG ELCANVQGNL MDEMLITIIQ GHAQRLGMKT IAGPVVLPLV MDTLSGIGVD
LIYGDVIADA QPLDLLVNSS YFAIN
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