Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_2330 |
Symbol | rfbA1 |
ID | 5586178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 2293065 |
End bp | 2293943 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640925995 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_001463390 |
Protein GI | 157157449 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0550352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGC GTAAAGGTAT TATTTTAGCG GGTGGTTCTG GTACACGTCT TTATCCTGTG ACTATGGCTG TCAGTAAACA GCTGTTACCG ATTTATGATA AACCGATGAT CTATTACCCG CTCTCTACAC TGATGTTGGC GGGTATTCGC GATATTCTGA TTATCAGTAC GCCACAGGAT ACTCCTCGTT TTCAACAACT GCTGGGTGAC GGGAGCCAGT GGGGGCTAAA TCTTCAGTAC AAAGTGCAAC CGAGTCCAGA TGGTCTTGCG CAGGCATTTA TCATCGGTGA AGAGTTTATC GGTGGTGATG ATTGTGCTTT GGTTCTAGGT GATAATATCT TTTACGGTCA CGATCTGCCG AAGTTAATGG ATGTCGCTGT TAACAAAGAA AGTGGTGCAA CGGTATTTGC CTATCACGTT AATGATCCTG AACGCTACGG TGTCGTTGAG TTTGATAAAA ACGGTACGGC AATAAGCCTG GAAGAAAAAC CGTTACAACC AAAAAGTAAT TATGCGGTAA CCGGGCTTTA TTTCTATGAT AACGACGTTG TCGAAATGGC GAAAAATCTT AAGCCTTCTG CCCGCGGTGA ACTGGAAATT ACCGATATTA ACCGTATTTA TATGGAACAG GGGCGTTTAT CCGTTGCCAT GATGGGGCGT GGATATGCAT GGCTGGACAC GGGAACACAT CAAAGTCTTA TTGAAGCAAG CAACTTTATT GCAACAATTG AAGAACGTCA GGGACTGAAA GTTTCCTGTC CGGAAGAAAT TGCTTACCGT AAACGGTTTA TTGATGCTGA GCAGGTGAAA GTATTAGCCG AACCGCTGAA GAAAAATGCT TATGGTCAGT ATCTGCTCAA AATGATTAAA GGTTATTAA
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Protein sequence | MKTRKGIILA GGSGTRLYPV TMAVSKQLLP IYDKPMIYYP LSTLMLAGIR DILIISTPQD TPRFQQLLGD GSQWGLNLQY KVQPSPDGLA QAFIIGEEFI GGDDCALVLG DNIFYGHDLP KLMDVAVNKE SGATVFAYHV NDPERYGVVE FDKNGTAISL EEKPLQPKSN YAVTGLYFYD NDVVEMAKNL KPSARGELEI TDINRIYMEQ GRLSVAMMGR GYAWLDTGTH QSLIEASNFI ATIEERQGLK VSCPEEIAYR KRFIDAEQVK VLAEPLKKNA YGQYLLKMIK GY
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