Gene EcE24377A_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2329 
SymbolrfbC 
ID5588704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand- 
Start bp2292512 
End bp2293060 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content40% 
IMG OID640925994 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001463389 
Protein GI157158061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.177999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAA TTAAAACTGA AATTCCAGAC GTACTGATTT TTGAACCGAA AGTTTTTGGT 
GATGAGCGTG GTTTCTTTTT TGAGAGCTTT AACCAGAAGG TTTTTGAGGA AGCTGTAGGC 
CGCAAAGTTG AATTTGTCCA GGATAACCAT TCGAAGTCTT GTAAAGGTGT CTTACGCGGA 
TTGCATTATC AGTTAGAACC TTATGCACAA GGGAAATTGG TGCGCTGCGT TGTTGGTGAA 
GTTTTTGATG TTGCGGTTGA TATTCGTAAA TCGTCACCAA CTTTTGGCAA ATGGGTTGGG 
GTGAATTTAT CTGCTGAGAA CAAGCGCCAG TTGTGGATAC CTGAAGGATT TGCACATGGT 
TTTTTGGTGC TGAGTGAGAC TGCGGAGTTT GTATATAAAA CTACAAATTA TTATCATCCG 
GAAAGTGATA GAGGGATCCG ATGGGATGAT GAGGAATTAT CTATTACGTG GCCTAGAGGA 
AATGAACTAA ACTTATCAAA TAAAGATCAG CAACATCCGA GCTTTCAAAA CTGTCAGTGT 
TTTGAATAA
 
Protein sequence
MNVIKTEIPD VLIFEPKVFG DERGFFFESF NQKVFEEAVG RKVEFVQDNH SKSCKGVLRG 
LHYQLEPYAQ GKLVRCVVGE VFDVAVDIRK SSPTFGKWVG VNLSAENKRQ LWIPEGFAHG 
FLVLSETAEF VYKTTNYYHP ESDRGIRWDD EELSITWPRG NELNLSNKDQ QHPSFQNCQC 
FE