Gene EcE24377A_2179 details

Gene Information

• Locus tag: EcE24377A_2179
• Symbol: fliN
• ID: 5589716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 2150671
• End bp: 2151084
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640925848
• Product: flagellar motor switch protein FliN
• Protein accession: YP_001463248
• Protein GI: 157157681
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00000312484
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGACA TGAATAATCC GGCCGATGAC AACAACGGCG CAATGGACGA TCTGTGGGCT 
GAAGCGTTGA GCGAACAAAA ATCAACCAAC AGCAAAAGCG CTGCCGACGC GGTGTTCCAG 
CAATTTGGCG GTGGTGATGT CAGCGGAACG TTGCAGGATA TCGACCTGAT AATGGATATT 
CCGGTCAAGC TGACCGTCGA GCTGGGCCGC ACACGAATGA CCATCAAAGA GCTGTTGCGT 
CTGACGCAAG GGTCCGTCGT GGCGCTGGAC GGTCTGGCGG GCGAACCACT GGATATTCTG 
ATCAACGGTT ATTTAATTGC CCAGGGCGAA GTGGTGGTCG TTGCCGATAA ATATGGCGTG 
CGGATCACCG ATATCATTAC TCCGTCTGAG CGAATGCGCC GCCTGAGCCG TTAG 

 

Protein sequence

MSDMNNPADD NNGAMDDLWA EALSEQKSTN SKSAADAVFQ QFGGGDVSGT LQDIDLIMDI 
PVKLTVELGR TRMTIKELLR LTQGSVVALD GLAGEPLDIL INGYLIAQGE VVVVADKYGV 
RITDIITPSE RMRRLSR