Gene EcE24377A_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcE24377A_2146 
SymboluvrC 
ID5587924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli E24377A 
KingdomBacteria 
Replicon accessionNC_009801 
Strand
Start bp2119695 
End bp2121527 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content52% 
IMG OID640925816 
Productexcinuclease ABC subunit C 
Protein accessionYP_001463216 
Protein GI157155145 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.3615e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGATC AGTTTGACGC AAAAGCGTTT TTAAAAACCG TAACCAGCCA GCCAGGCGTT 
TATCGCATGT ACGATGCTGG TGGTACGGTT ATCTATGTCG GCAAAGCGAA AGACCTGAAA
AAACGGCTTT CCAGCTATTT CCGTAGCAAC CTCGCTTCGC GCAAAACCGA AGCGCTGGTC
GCCCAGATCC AGCAAATTGA TGTAACGGTT ACTCACACAG AAACCGAAGC GCTGTTGCTG
GAACACAACT ACATCAAACT CTATCAGCCG CGTTACAACG TTTTGCTACG CGATGATAAA
TCATATCCTT TTATCTTCCT GAGTGGTGAT ACCCACCCGC GTCTGGCGAT GCATCGTGGT
GCGAAGCATG CCAAAGGTGA ATATTTCGGC CCGTTCCCGA ATGGCTATGC CGTACGTGAA
ACACTGGCGC TACTGCAAAA GATTTTCCCC ATTCGCCAGT GCGAAAATAG TGTTTATCGC
AATCGCTCGC GTCCGTGTCT GCAATACCAG ATAGGGCGCT GTCTGGGACC GTGCGTTGAA
GGACTGGTGA GTGAAGAAGA ATACGCTCAG CAGGTCGAGT ATGTGCGCCT GTTTTTGTCT
GGCAAAGATG ATCAGGTGCT TACGCAACTC ATTAGTCGTA TGGAAACTGC CAGCCAGAAT
CTGGAGTTTG AAGAAGCTGC ACGTATTCGC GACCAAATTC AGGCGGTGCG ACGCGTCACC
GAAAAACAAT TCGTTTCCAA TACCGGCGAC GACCTCGACG TTATTGGTGT GGCGTTCGAT
GCGGGCATGG CTTGTGTCCA CGTATTGTTC ATTCGTCAGG GCAAAGTGCT CGGCAGCCGC
AGCTATTTCC CGAAAGTGCC TGGCGGTACG GAACTGAGCG AGGTGGTAGA AACCTTCGTA
GGCCAGTTCT ATTTACAAGG CAGCCAGATG CGCACCTTAC CGGGTGAGAT CCTGCTCGAT
TTTAATCTTA GCGATAAAAC GCTGCTCGCC GATTCCCTTT CAGAACTGGC GGGACGCAAG
ATTAATGTTC AAACCAAACC TCGCGGCGAT AGGGCGCGTT ATCTGAAACT CGCGCGCACC
AATGCGGCGA CGGCCTTAAC CAGCAAACTT TCGCAGCAAT CTACCGTTCA CCAGCGACTG
ACCGCGCTTG CCAGCGTGTT GAAATTGCCG GAAGTGAAGC GGATGGAGTG CTTTGACATC
AGCCATACCA TGGGCGAACA AACCGTCGCT TCCTGTGTGG TGTTTGATGC TAACGGCCCG
CTGCGTGCGG AGTATCGGCG CTATAACATT ACAGGCATCA CGCCGGGCGA TGATTATGCG
GCGATGAATC AGGTGCTGCG TCGGCGTTAT GGTAAAGCCA TTGACGACAG TAAGATCCCG
GATGTGATCC TTATCGACGG CGGCAAAGGC CAGCTTGCGC AGGCGAAAAA TGTCTTCGCC
GAACTGGATG TCTCATGGGA TAAAAATCAT CCGCTGCTAC TTGGCGTTGC CAAAGGAGCA
GATCGTAAGG CTGGACTGGA AACGCTGTTC TTTGAGCCGG AAGGTGAGGG ATTTAGTTTG
CCGCCAGATT CACCCGCGCT GCATGTTATC CAGCATATTC GCGATGAATC ACATGATCAC
GCGATTGGCG GGCACCGTAA AAAACGGGCG AAGGTCAAAA ATACCAGTTC CCTGGAAACC
ATTGAAGGCG TCGGGCCAAA ACGTCGGCAA ATGTTGTTGA AATATATGGG CGGTTTGCAA
GGTTTACGTA ACGCCAGCGT CGAGGAAATT GCAAAAGTGC CGGGTATTTC GCAAGGTCTG
GCAGAAAAGA TCTTCTGGTC GTTGAAACAT TGA
 
Protein sequence
MSDQFDAKAF LKTVTSQPGV YRMYDAGGTV IYVGKAKDLK KRLSSYFRSN LASRKTEALV 
AQIQQIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPFIFLSGD THPRLAMHRG
AKHAKGEYFG PFPNGYAVRE TLALLQKIFP IRQCENSVYR NRSRPCLQYQ IGRCLGPCVE
GLVSEEEYAQ QVEYVRLFLS GKDDQVLTQL ISRMETASQN LEFEEAARIR DQIQAVRRVT
EKQFVSNTGD DLDVIGVAFD AGMACVHVLF IRQGKVLGSR SYFPKVPGGT ELSEVVETFV
GQFYLQGSQM RTLPGEILLD FNLSDKTLLA DSLSELAGRK INVQTKPRGD RARYLKLART
NAATALTSKL SQQSTVHQRL TALASVLKLP EVKRMECFDI SHTMGEQTVA SCVVFDANGP
LRAEYRRYNI TGITPGDDYA AMNQVLRRRY GKAIDDSKIP DVILIDGGKG QLAQAKNVFA
ELDVSWDKNH PLLLGVAKGA DRKAGLETLF FEPEGEGFSL PPDSPALHVI QHIRDESHDH
AIGGHRKKRA KVKNTSSLET IEGVGPKRRQ MLLKYMGGLQ GLRNASVEEI AKVPGISQGL
AEKIFWSLKH