| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1878 |
|---|
| Symbol | |
|---|
| ID | 5587846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli E24377A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009801 |
|---|
| Strand | - |
|---|
| Start bp | 1870689 |
|---|
| End bp | 1871945 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640925554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001462959 |
|---|
| Protein GI | 157156334 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000220122 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATCTG ATGCGAAAAA CTTGATGAGC GACGGGAATG TGCAAATTGT TAAGACCGGC
GAGGTCATTG GCGCGACGCA ACTTACTGAA GGCGAGTTGA TTGTTGAAGC TGGCGGAAGA
GCCGAAAATA CCGTGGTCAC GGGGGCTGGC TGGTTGAAAG TGGCAACCGG TGGGATCGCC
AAATGCACAC AGTACGGTAA CAATGGCACG CTATCGGTCA GCGACGGTGC CATTGCCACA
GATATTGTTC AGTCCGAGGG AGGCGCAATT AGTCTCTCTA CGCTCGCTAC GGTTAATGGC
CGCCATCCCG AAGGTGAATT CAGCGTTGAT CAGGGTTATG CCTGCGGTTT GTTGCTGGAA
AATGGCGGTA ACCTGCGTGT ACTGGAAGGG CATCGCGCGG AAAAAATCAT TCTCGATCAA
GAGGGCGGCC TGTTGGTTAA TGGGACAACC TCAGCGGTCG TGGTAGATGA AGGTGGTGAA
TTGTTGGTGT ATCCAGGTGG GGAAGCCAGC AATTGTGAGA TTAATCAGGG CGGCGTTTTT
ATGCTGGCCG GGAAAGCCAG TGATACGTTG CTTGCTGGTG GCACCATGAA TAATCTCGGT
GGTGAAGACT CTGACACTAT TGTTGAGAAT GGATCCATTT ATCGTCTGGG GACGGATGGC
CTTCAGCTCT ACAGTTCCGG TAAGACGCAA AACCTGTCCG TGAATGTGGG TGGTCGGGCT
GAAGTGCATG CCGGTACGCT GGAAAATGCG GTAATACAAG GTGGAACAGT GATCCTGTTG
TCACCCACCA GCGCGGACGA AAATTTTGTC GTAGAGGAAG ATCGCGCACC GGTTGAACTG
ACCGGGAGTG TTGCATTACT GGACGGCGCT TCAATGATTA TTGGCTATGG CGCAGATCTG
CAACAATCAA CGATTACTGT ACAGCAGGGC GGTGTGTTGA TTCTCGACGG CAGTACGGTA
AAAGGTGACG GTGTCACTTT TATTGTTGGT AACATCAATC TGAATGGCGG AAAACTGTGG
CTGATCACTG GTGCGGCAAC GCATGTGCAA CTGAAAGTGA AACGCCTGCG CGGAGAGGGA
GCGATTTGCC TGCAAACCAG TGCGAAAGAA ATCTCACCTG ACTTCATCAA TGTGAAAGGG
GAAGTTACCG GGGATATACA CGTTGAGATA ACAGATGCCA GTCGGCAAAC TCTGTGCAAC
GCTCTGAAAT TACAGCCAGA CGAAGACGGG ATTGGCGCAA CGCTCCAGCC TGCGTAA
|
|---|
| Protein sequence | MGSDAKNLMS DGNVQIVKTG EVIGATQLTE GELIVEAGGR AENTVVTGAG WLKVATGGIA
KCTQYGNNGT LSVSDGAIAT DIVQSEGGAI SLSTLATVNG RHPEGEFSVD QGYACGLLLE
NGGNLRVLEG HRAEKIILDQ EGGLLVNGTT SAVVVDEGGE LLVYPGGEAS NCEINQGGVF
MLAGKASDTL LAGGTMNNLG GEDSDTIVEN GSIYRLGTDG LQLYSSGKTQ NLSVNVGGRA
EVHAGTLENA VIQGGTVILL SPTSADENFV VEEDRAPVEL TGSVALLDGA SMIIGYGADL
QQSTITVQQG GVLILDGSTV KGDGVTFIVG NINLNGGKLW LITGAATHVQ LKVKRLRGEG
AICLQTSAKE ISPDFINVKG EVTGDIHVEI TDASRQTLCN ALKLQPDEDG IGATLQPA
|
|---|
| |