Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcE24377A_1686 |
Symbol | yddA |
ID | 5589904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli E24377A |
Kingdom | Bacteria |
Replicon accession | NC_009801 |
Strand | - |
Start bp | 1687493 |
End bp | 1689178 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640925369 |
Product | inner membrane ABC transporter ATP-binding protein yddA |
Protein accession | YP_001462774 |
Protein GI | 157156021 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAACCA TTCCCATTAC GTTTTGTATG TTGATAGCAA AGTATCTCTG TCTGTTGAAG CCCTTTTGGC TGCGTAAGAA TAATAAAACT TCAGTGCTGT TAATCATTAT TATCCTCGCC ATGATCCTTG GCGTGGTTAA AATTCAGGTC TGGTTAAACG ACTGGAATAA TGATTTTTTC AATGCGCTAA GCCAGAAAGA AACCGATAAG CTTTGGCAGC TTGTCCTTTG GTTCCCTGCC CTGCTGGGGA TCTTTGTATT AATATCCGTG AACAAAACAT GGTTAATTAA ACTGCTGACT ATTCGCTGGC GCGAATGGTT AACAGATTAC TACCTTAATC GCTGGTTTGC AGATAAAAAC TACTACTTCA CGCAGATCTA CGGCGAGCAT AAAAATACAG ATAACCCTGA CCAACGTATC GCTGAAGACA TTCTCTTACT AATCAGCAAA ACGCTCAGTC TTTCATTTGG CTTCATCCAG TCACTTAGCA TGCTGATCAC CTTTACCGTT ATTCTTTGGC AAAGCGCGGG TACGCTCTCA TTCACTGTTG GTGGAACAGA ATGGAATATC CAGGGGTATA TGGTCTATAC CGTTGTGCTC ATTGTGATCG GTGGAACTTT ATTTACCCAT AAGGTTGGTA AGCGTATTCG TCCGCTTAAT GTGGAAAAAC AACGTAGCGA AGCGACATTT CGAACTAATC TTGTGCAGCA TAATAAGCAG GCAGAACTGA TTGCGCTAAG CAATGCTGAG TCTCTACAAC GCCAGGAGTT GAGCGACAAT TTTCATACCA TTAAAGAGAA CTGGCATCGT TTAATGAATC GTCAGCGGTG GCTTGATTAC TGGCAAAATA TTTATTCGCG CTCGCTTAGC GTTCTTCCCT ACTTTCTGTT ATTGCCGCAG TTTATTAGCG GGCAGATCAA TCTGGGCGGA CTAATGAAAT CGCGCCAGGC ATTTATGCTA GTATCGAACA ATTTAAGCTG GTTTATTTAT AAATATGACG AACTTGCTGA GCTGGCTGCG GTTATCGATC GCTTGTATGA GTTCCATCAA CTCACTGAAC AGCGCCCTAC GAATAAGCCT AAAAATTGCC AACATGCGGT ACAAGTGGCT AATGCGAGTA TTCGTACGCC TGATAATAAG ATCATATTAG AGAACTTGAA CTTTCATGTT TCGCCAGGCA AATGGCTATT ACTGAAAGGC TACTCTGGTG CGGGAAAAAC CACACTGCTT AAAACATTAT CCCACTGCTG GCCGTGGTTT AAAGGTGATA TTTCTTCTCC TGCTGACAGT TGGTATGTGT CACAAACACC GTTAATCAAA AGCGGCTTAC TGAAAGAGAT TATTTGTAAA GCACTTCCCC TGCCCGTAGA CGATAAATCG TTGAGCGAAG TACTGCATCA GGTTGGTCTG GGGAAATTGG CTGCGCGTAT TCATGAGCAC GATCGCTGGG GAGATATTCT TTCCAGCGGC GAAAAACAAC GTATCGCCCT GGCACGATTA ATTTTACGAC GTCCGAAATG GATATTTCTT GACGAAACTA CCTCTCATCT TGAGGAACAA GAGGCTATAC GCTTACTGCG TTTAGTGCGT GAAAAACTAC CCACAAGCGG CGTCATTATG GTTACACATC AACCCGGTGT CTGGAACCTG GCTGATGATA TTTGTGACAT TAGCACGGTT TTATAA
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Protein sequence | MITIPITFCM LIAKYLCLLK PFWLRKNNKT SVLLIIIILA MILGVVKIQV WLNDWNNDFF NALSQKETDK LWQLVLWFPA LLGIFVLISV NKTWLIKLLT IRWREWLTDY YLNRWFADKN YYFTQIYGEH KNTDNPDQRI AEDILLLISK TLSLSFGFIQ SLSMLITFTV ILWQSAGTLS FTVGGTEWNI QGYMVYTVVL IVIGGTLFTH KVGKRIRPLN VEKQRSEATF RTNLVQHNKQ AELIALSNAE SLQRQELSDN FHTIKENWHR LMNRQRWLDY WQNIYSRSLS VLPYFLLLPQ FISGQINLGG LMKSRQAFML VSNNLSWFIY KYDELAELAA VIDRLYEFHQ LTEQRPTNKP KNCQHAVQVA NASIRTPDNK IILENLNFHV SPGKWLLLKG YSGAGKTTLL KTLSHCWPWF KGDISSPADS WYVSQTPLIK SGLLKEIICK ALPLPVDDKS LSEVLHQVGL GKLAARIHEH DRWGDILSSG EKQRIALARL ILRRPKWIFL DETTSHLEEQ EAIRLLRLVR EKLPTSGVIM VTHQPGVWNL ADDICDISTV L
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