Gene EcE24377A_1582 details

Gene Information

• Locus tag: EcE24377A_1582
• Symbol: pcaF
• ID: 5590318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli E24377A
• Kingdom: Bacteria
• Replicon accession: NC_009801
• Strand: +
• Start bp: 1569794
• End bp: 1570999
• Gene Length: 1206 bp
• Protein Length: 401 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640925272
• Product: beta-ketoadipyl CoA thiolase
• Protein accession: YP_001462677
• Protein GI: 157155298
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02430] beta-ketoadipyl CoA thiolase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTGAAG CCTTTATCTG TGACGGAATT CGTACGCCAA TTGGCCGCTA TGGTGGGGCA 
TTATCAGGTG TTCGGGCTGA CGATCTGGCT GCTATCCCTT TGCGGGAGCT GCTGGTGCGA 
AACCCGCGTC TCGATGCGGA GTGTATCGAT GATGTGATCC TCGGCTGTGC TAATCAGGCG 
GGAGAAGACA ACCGTAACGT AGCCCGGATG GCGACGTTAC TGGCGGGGCT GCCGCAGAGT 
GTTTCCGGCA CAACCATTAA CCGCTTGTGT GGTTCCGGGC TGGACGCACT GGGGTTCGCC 
GCACGGGCGA TTAAAGCGGG CGATGGCGAT TTGCTGATCG CTGGTGGCGT GGAGTCAATG 
TCTCGGGCAC CGTTTGTTAT GGGCAAGGCA ACCAGTGCAT TTTCTCGTCA GGCTGAGATG 
TTTGATACCA CTATTGGCTG GCGATTTGTG AACCCGCTCA TGGCTCAACA ATTTGGAACT 
GACAGCATGC CGGAAACGGC AGAGAATGTA GCTGAACTGT TAAAAATATC GCGAGAAGAT 
CAAGATAGTT TTGCGCTACG CAGTCAGCAA CGTACGGCAA AAGCGCAATC CTCAGGCATT 
CTGGCTGAGG AGATTGTTCC GGTTGTGTTG AAAAACAAGA AAGGCGTTGT AACAGAAATA 
CAACATGATG AGCATCTGCG CCCGGAAACG ACGCTGGAAC AGTTACGTGG GTTAAAAGCA 
CCATTTCGTG CCAATGGGGT GATTACCGCA GGCAATGCCT CCGGGGTGAA TGACGGAGCC 
GCTGCGTTGA TTATTGCCAG TGAACAGATG GCAGCAGCGC AAGGACTGAC ACCGCGGGCG 
CGAATCGTAG CCATGGCAAC CGCCGGGGTG GAACCGCGCC TGATGGGGCT TGGTCCGGTG 
CCTGCAACTC GCCGGGTGCT GGAACGCGCG GGGCTGAGTA TTCACGATAT GGACGTGATT 
GAACTGAACG AAGCGTTCGC GGCCCAGGCG TTGGGTGTAC TACGCGAATT GGGGCTGCCT 
GATGATGCCC CACATGTTAA CCCCAACGGA GGCGCTATCG CCTTAGGCCA TCCGTTGGGA 
ATGAGTGGTG CCCGCCTGGC ACTGGCTGCC AGCCATGAGC TGCATCGGCG TAACGGTCGT 
TACGCATTGT GCACCATGTG CATCGGTGTC GGTCAGGGCA TCGCCATGAT TCTGGAGCGT 
GTTTGA 

 

Protein sequence

MREAFICDGI RTPIGRYGGA LSGVRADDLA AIPLRELLVR NPRLDAECID DVILGCANQA 
GEDNRNVARM ATLLAGLPQS VSGTTINRLC GSGLDALGFA ARAIKAGDGD LLIAGGVESM 
SRAPFVMGKA TSAFSRQAEM FDTTIGWRFV NPLMAQQFGT DSMPETAENV AELLKISRED 
QDSFALRSQQ RTAKAQSSGI LAEEIVPVVL KNKKGVVTEI QHDEHLRPET TLEQLRGLKA 
PFRANGVITA GNASGVNDGA AALIIASEQM AAAQGLTPRA RIVAMATAGV EPRLMGLGPV 
PATRRVLERA GLSIHDMDVI ELNEAFAAQA LGVLRELGLP DDAPHVNPNG GAIALGHPLG 
MSGARLALAA SHELHRRNGR YALCTMCIGV GQGIAMILER V