| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_1561 |
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| Symbol | ydbK |
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| ID | 5589265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 1546161 |
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| End bp | 1549685 |
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| Gene Length | 3525 bp |
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| Protein Length | 1174 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640925251 |
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| Product | pyruvate-flavodoxin oxidoreductase |
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| Protein accession | YP_001462656 |
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| Protein GI | 157155711 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACTA TTGACGGTAA TGGCGCGGTT GCTTCGGTGG CGTTTCGCAC CAGTGAAGTT
ATCGCCATCT ACCCTATTAC CCCCAGTTCC ACGATGGCAG AACAGGCTGA TGCCTGGGCC
GGAAACGGCT TAAAGAACGT TTGGGGAGAC ACACCACGCG TAGTTGAAAT GCAGTCGGAA
GCGGGTGCTA TCGCTACCGT GCATGGCGCT TTGCAGACGG GTGCCCTTTC AACATCGTTT
ACGTCATCGC AGGGTTTGCT GCTGATGATC CCGACGCTGT ACAAACTGGC AGGCGAACTG
ACGCCATTTG TCCTGCATGT AGCGGCACGT ACCGTTGCCA CACATGCACT TTCTATTTTT
GGCGATCATT CCGACGTTAT GGCGGTGCGC CAGACGGGTT GCGCGATGTT GTGTGCGGCT
AACGTCCAGG AAGCGCAAGA TTTTGCTCTC ATTTCGCACA TCGCAACGCT GAAGAGCCGC
GTGCCATTTA TTCATTTCTT TGATGGTTTC CGCACGTCCC ACGAAATCAA TAAAATTGTC
CCGCTGGCCG ATGACACTAT TCTTGATCTC ATGCCGCAGG CCGAAATTGA TGCTCATCGC
GCCCGGGCGC TCAACCCGGA ACATCCGGTG ATCCGCGGTA CGTCCGCCAA TCCTGACACT
TATTTCCAGT CTCGCGAAGC CACCAACCCA TGGTACGACG CGGTCTATGA CCATGTTGAA
CAGGCGATGA ATGATTTCTC TGCCGCGACA GGTCGTCAGT ATCAGCCGTT TGAATATTAC
GGGCATCCGC AAGCGGAACG GGTGATTATC CTGATGGGCT CTGCCATTGG CACCTGTGAA
GAAGTGGTTG ATGAATTGCT AACCCGTGGC GAAAAAGTTG GCGTGCTGAA AGTTCGCCTG
TACCGTCCCT TCTCCGCCAA ACACTTGCTG CAAGCTCTGC CGGGATCCGT ACGCAGCGTG
GCGGTACTGG ACAGAACCAA AGAACCCGGT GCCCAGGCAG AACCGCTCTA TCTGGATGTA
ATGACCGCAC TGGCAGAAGC CTTTAATAAT GGCGAGCGCG AAACTCTGCC CCGTGTCATT
GGTGGGCGCT ATGGTCTTTC ATCCAAAGAA TTTGGCCCGG ACTGTGTACT GGCGGTATTT
GCCGAGCTCA ACGCGGCTAA ACCGAAAGCG CGCTTTACGG TTGGTATTTA CGATGATGTG
ACCAATCTGT CACTGCCGTT GCCGGAAAAC ACCCTGCCAA ACTCGGCGAA ACTGGAAGCC
TTGTTTTATG GCCTTGGTAG TGATGGCAGC GTTTCCGCGA CCAAAAACAA TATCAAGATT
ATCGGTAATT CCACGCCGTG GTACGCACAG GGCTATTTTG TTTACGACTC CAAAAAGGCG
GGCGGCCTGA CGGTTTCTCA CCTTCGCGTG AGCGAACAGC CGATTCGTTC CGCTTATCTC
ATTTCCCAGG CTGATTTTGT TGGCTGCCAC CAGTTGCAGT TTATCGATAA ATATCAGATG
GCTGAGCGTT TAAAACCTGG CGGCATTTTC CTGCTCAACA CGCCGTACAG CGCAGATGAA
GTGTGGTCGC GCTTGCCGCA GGAAGTTCAG GCCGTGCTAA ATCAGAAAAA AGCGCGCTTC
TATGTGATTA ACGCGGCGAA AATCGCCCGC GAATGTGGCC TGGCGGCCCG TATTAATACC
GTCATGCAGA TGGCTTTTTT CCATCTGACG CAAATTCTGC CTGGCGATAG CGCCCTCGCA
GAATTGCAGG GTGCGATTGC CAAAAGTTAC AGTAGCAAAG GCCAGGATCT GGTGGAACGC
AACTGGCAGG CTCTGGCGCT GGCGCGTGAA TCCGTAGAAG AAGTTCCGTT GCAACCGGTA
AATCCGCACA GCGCCAATCG ACCGCCAGTG GTTTCCGATG CCGCCCCTGA TTTCGTGAAA
ACCGTAACCG CAGCGATGCT CGCAGGGCTT GGTGATGCCC TCCCCGTTTC GGCGCTGCCG
CCAGACGGCA CCTGGCCGAT GGGCACCACT CGCTGGGAAA AACGCAATAT CGCCGAAGAG
ATCCCCATCT GGAAAGAGGA ACTCTGTACC CAATGTAACC ACTGCGTCGC CGCTTGCCCA
CACTCAGCTA TTCGCGCAAA AGTGGTACCG CCTGAAGCGA TGGAAAACGC CCCTGCCAGC
CTGCATTCGC TGGATGTGAA ATCGCGTGAT ATGCGCGGGC AGAAATATGT CTTGCAGGTG
GCTCCGGAAG ATTGCACCGG TTGTAACCTG TGCGTCGAAG TTTGCCCGGC GAAAGACCGT
CAGAATCCAG AGATTAAAGC CATCAATATG ATGTCGCGCC TGGAACATGT CGAAGAAGAG
AAAATCAATT ACGATTTCTT CCTCAACCTG CCAGAAATCG ACCGTAGCAA ACTGGAACGT
ATTGATATTC GTACATCGCA GCTGATTACA CCGCTGTTTG AATATTCAGG TGCTTGCTCC
GGTTGTGGCG AGACGCCGTA TATTAAATTG CTGACTCAGC TCTATGGCGA CCGGATGTTG
ATCGCTAACG CCACCGGCTG TTCTTCAATT TATGGCGGTA ACCTGCCCTC TACACCGTAT
ACCACCGATG CCAACGGTCG TGGGCCGGCA TGGGCGAACT CTCTGTTTGA AGATAATGCC
GAATTTGGCC TTGGTTTCCG CCTGACGGTC GATCAACACC GTGTCCGCGT GCTGCGTCTG
CTGGATCAAT TTGCCGATAA AATCCCGGCG GAATTACTGA CAGCGTTGAA ATCAGACGCT
ACGCCAGAGG TTCGTCGAGA ACAGGTCGCA GCTTTACGCC AGCAACTCAA CGATGTTGCC
GAAGCACATG AACTGCTGCG TGACGCAGAT GCACTGGTGG AAAAATCAAT CTGGCTGATT
GGTGGCGACG GCTGGGCTTA CGATATCGGC TTTGGCGGTC TGGATCATGT ATTGAGTTTG
ACGGAAAACG TCAACATTCT GGTGCTGGAT ACGCAATGCT ATTCCAACAC CGGTGGTCAG
GCGTCGAAAG CGACACCGCT GGGTGCAGTA ACTAAATTTG GCGAGCACGG CAAACGTAAA
GCGCGTAAAG ATCTTGGCGT CAGTATGATG ATGTACGGTC ATGTTTATGT GGCGCAGATT
TCTCTCGGCG CGCAGCTCAA CCAGACGGTG AAAGCGATTC AGGAAGCGGA AGCGTATCCG
GGGCCATCGC TGATCATCGC TTATAGCCCA TGTGAAGAGC ATGGTTACGA TCTGGCACTC
AGCCACGACC AGATGCGCCA ACTCACAGCT ACCGGCTTCT GGCCGCTATA TCGCTTCGAT
CCGCGTCGTG CCGATGAAGG CAAACTGCCG CTGGCGCTGG ATTCACGCCC GCCGTCAGTA
GCACTGGAAG AAACGTTACT TCACGAGCAA CGTTTCCGTC GGCTGAATTC GCAGCAGCCA
GAAGTGGCAG AACAGTTATG GAAAGATGCT GCAGCTGATT TGCAAAAACG CTATGACTTC
CTGGCACAAA TGGCCGGAAA AGCGGAAAAA AGCAACACCG ATTAA
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| Protein sequence | MITIDGNGAV ASVAFRTSEV IAIYPITPSS TMAEQADAWA GNGLKNVWGD TPRVVEMQSE
AGAIATVHGA LQTGALSTSF TSSQGLLLMI PTLYKLAGEL TPFVLHVAAR TVATHALSIF
GDHSDVMAVR QTGCAMLCAA NVQEAQDFAL ISHIATLKSR VPFIHFFDGF RTSHEINKIV
PLADDTILDL MPQAEIDAHR ARALNPEHPV IRGTSANPDT YFQSREATNP WYDAVYDHVE
QAMNDFSAAT GRQYQPFEYY GHPQAERVII LMGSAIGTCE EVVDELLTRG EKVGVLKVRL
YRPFSAKHLL QALPGSVRSV AVLDRTKEPG AQAEPLYLDV MTALAEAFNN GERETLPRVI
GGRYGLSSKE FGPDCVLAVF AELNAAKPKA RFTVGIYDDV TNLSLPLPEN TLPNSAKLEA
LFYGLGSDGS VSATKNNIKI IGNSTPWYAQ GYFVYDSKKA GGLTVSHLRV SEQPIRSAYL
ISQADFVGCH QLQFIDKYQM AERLKPGGIF LLNTPYSADE VWSRLPQEVQ AVLNQKKARF
YVINAAKIAR ECGLAARINT VMQMAFFHLT QILPGDSALA ELQGAIAKSY SSKGQDLVER
NWQALALARE SVEEVPLQPV NPHSANRPPV VSDAAPDFVK TVTAAMLAGL GDALPVSALP
PDGTWPMGTT RWEKRNIAEE IPIWKEELCT QCNHCVAACP HSAIRAKVVP PEAMENAPAS
LHSLDVKSRD MRGQKYVLQV APEDCTGCNL CVEVCPAKDR QNPEIKAINM MSRLEHVEEE
KINYDFFLNL PEIDRSKLER IDIRTSQLIT PLFEYSGACS GCGETPYIKL LTQLYGDRML
IANATGCSSI YGGNLPSTPY TTDANGRGPA WANSLFEDNA EFGLGFRLTV DQHRVRVLRL
LDQFADKIPA ELLTALKSDA TPEVRREQVA ALRQQLNDVA EAHELLRDAD ALVEKSIWLI
GGDGWAYDIG FGGLDHVLSL TENVNILVLD TQCYSNTGGQ ASKATPLGAV TKFGEHGKRK
ARKDLGVSMM MYGHVYVAQI SLGAQLNQTV KAIQEAEAYP GPSLIIAYSP CEEHGYDLAL
SHDQMRQLTA TGFWPLYRFD PRRADEGKLP LALDSRPPSV ALEETLLHEQ RFRRLNSQQP
EVAEQLWKDA AADLQKRYDF LAQMAGKAEK SNTD
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